RNA–Protein interactions for RNA: ENST00000462862.1

ERCC4-203, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 3

Gene ERCC4, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-203ENST00000462862 H1FOOQ8IZA3 346 aaPredicted RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 C1orf87Q8N0U7 546 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 RBMXL3Q8N7X1 1067 aaKnown RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 SUMF2Q8NBJ7 301 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 SCCPDHQ8NBX0 429 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 OR10A7Q8NGE5 316 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 OR5T2Q8NGG2 359 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 OR11L1Q8NGX0 322 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 MRPL30Q8TCC3 161 aaKnown RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 ST8SIA2Q92186 375 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 DCUN1D4Q92564 292 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 LSM10Q969L4 123 aaKnown RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 TOMM40LQ969M1 308 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 TMEM230Q96A57 120 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 GALMQ96C23 342 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 RAB39BQ96DA2 213 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 C18orf12Q96KH6 178 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 VKORC1Q9BQB6 163 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 AIFM2Q9BRQ8 373 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 SMDT1Q9H4I9 107 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 PLEKHF2Q9H8W4 249 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 TMEM165Q9HC07 324 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 PLSCR3Q9NRY6 295 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 MTCH1Q9NZJ7 389 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 OR6C3Q9NZP0 311 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 MYEF2Q9P2K5 600 aaKnown RBP3.5□□□□□ -1.85
ERCC4-203ENST00000462862 MBD2Q9UBB5 411 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 IL19Q9UHD0 177 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 DUSP13Q9UII6 198 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 JPT1Q9UK76 154 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 TRAPPC2LQ9UL33 140 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 RNF150Q9ULK6 438 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 GAB2Q9UQC2 676 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 ZNF835Q9Y2P0 537 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 CSAG2Q9Y5P2 127 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 NCOR2Q9Y618 2525 aa3.5□□□□□ -1.85
ERCC4-203ENST00000462862 FREM2Q5SZK8 3169 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 PTPRBP23467 1997 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 EPG5Q9HCE0 2579 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TRAV14DV4A0A0A6YYC5 116 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TRAV24A0A0B4J272 114 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 IGHV1-18A0A0C4DH31 117 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 C13orf42A0A1B0GVH6 325 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 RPS10-NUDT3A0A1W2PQS6 291 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 hCG_1807616A0A1W2PRN6 198 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 ANKRD34BA5PLL1 514 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TMEM8BA6NDV4 472 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 BTBD17A6NE02 478 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 LRRC30A6NM36 301 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 A8MXE2 369 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 FAM25EA8MYX2 175 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 B8ZZF3 427 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 EEF1E1-BLOC1S5C9J1V9 151 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 UMAD1C9J7I0 102 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 C16orf97H3BN30 126 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 SLC33A1O00400 549 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 SDCBPO00560 298 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TOR1AO14656 332 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 MGST3O14880 152 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 SHOXO15266 292 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 RBFOX2O43251 390 aaKnown RBP eCLIP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 HSPA12AO43301 675 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 NDUFA2O43678 99 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 NDUFS6O75380 124 aaKnown RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 MED6O75586 246 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TSPAN9O75954 239 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 DFFBO76075 338 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 OR2H2O95918 312 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 HAND1O96004 215 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 PLATP00750 562 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 MBPP02686 304 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 HEXAP06865 529 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 SERPINE2P07093 398 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 CD55P08174 381 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 FGF2P09038 288 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 SEC11BP0C7V7 166 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 IRF2P14316 349 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 MUC1P15941 1255 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 WT1P19544 449 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 ZP3P21754 424 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 AADACP22760 399 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 ANOS1P23352 680 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 GLRA1P23415 457 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 F2RP25116 425 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 NPBWR2P48146 333 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TDGF1P3P51864 188 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 LINC00310P59036 64 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 NKX6-1P78426 367 aaPredicted RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 PMP22Q01453 160 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 TAGLNQ01995 201 aaKnown RBP3.49□□□□□ -1.85
ERCC4-203ENST00000462862 C3AR1Q16581 482 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 CR1LQ2VPA4 569 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 Q5BKY6 102 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 GGNBP1Q5YKI7 109 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 Q6P435 159 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 VWA1Q6PCB0 445 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 DPPA3Q6W0C5 159 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 ZNF66Q6ZN08 573 aa3.49□□□□□ -1.85
ERCC4-203ENST00000462862 ACP7Q6ZNF0 438 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms