RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 HERPUD1Q15011 391 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 OR2D3Q8NGH3 330 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 TAF15Q92804 592 aaKnown RBP eCLIP13.78□□□□□ -0.27e-26■■■■□ 25.9
SMC4-204ENST00000462787 TMEM250H0YL14 139 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 UCP3P55916 312 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 CYB5R2Q6BCY4 276 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 OR2V2Q96R30 315 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 GDF15Q99988 308 aa13.78□□□□□ -0.2
SMC4-204ENST00000462787 CNIH1O95406 144 aa13.77□□□□□ -0.2
SMC4-204ENST00000462787 OR10X1Q8NGY0 326 aa13.77□□□□□ -0.2
SMC4-204ENST00000462787 DCAF16Q9NXF7 216 aa13.77□□□□□ -0.2
SMC4-204ENST00000462787 NDUFB4O95168 129 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 SP1P08047 785 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 MPLP40238 635 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 LYRM7Q5U5X0 104 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 TGIF2LYQ8IUE0 185 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 BOD1Q96IK1 185 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 RNF126Q9BV68 326 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 LOC102724200A0A096LPH7 203 aaPredicted RBP13.77□□□□□ -0.21
SMC4-204ENST00000462787 IFITM10A6NMD0 228 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 LBX1P52954 281 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 SPATA46Q5T0L3 261 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 OR2I1PQ8NGU4 316 aa13.77□□□□□ -0.21
SMC4-204ENST00000462787 HSD17B10Q99714 261 aaKnown RBP13.77□□□□□ -0.21
SMC4-204ENST00000462787 MRPL18Q9H0U6 180 aaKnown RBP13.77□□□□□ -0.21
SMC4-204ENST00000462787 PMELP40967 661 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 LCN2P80188 198 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 ARSJQ5FYB0 599 aaPredicted RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 SLC25A28Q96A46 364 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 GNRHR2Q96P88 292 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 KCNK17Q96T54 332 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 IGKV1D-42A0A075B6H8 117 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 TRGV10A0A0A0MS01 117 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 SMPD2O60906 423 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 HLA-DQA1P01909 254 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 CHRNB4P30926 498 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 SELENOHQ8IZQ5 122 aaKnown RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 D2HGDHQ8N465 521 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 OR1K1Q8NGR3 316 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 Q8WTZ3 238 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 PSMG3Q9BT73 122 aaPredicted RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 A0A1W2PR80 420 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 C4orf51C9J302 202 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 IL9P15248 144 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 C16orf47Q6ZP98 133 aaPredicted RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 MPDU1O75352 247 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 FAM87AP0C7U9 286 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 RAC3P60763 192 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 SRSF5Q13243 272 aaKnown RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 KLF13Q9Y2Y9 288 aaPredicted RBP13.76□□□□□ -0.21
SMC4-204ENST00000462787 ARID2Q68CP9 1835 aa13.76□□□□□ -0.21
SMC4-204ENST00000462787 DHRS7CA6NNS2 312 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 GREM1O60565 184 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 NEURL1O76050 574 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 VENTXO95231 258 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 STARD6P59095 220 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 IL19Q9UHD0 177 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 PMS2P1A4D2B8 440 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 EML2O95834 649 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 HIST1H1EP10412 219 aaKnown RBP13.75□□□□□ -0.21
SMC4-204ENST00000462787 OR4S2Q8NH73 311 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 HAND1O96004 215 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 GABRG2P18507 467 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 TRBV9A0A0B4J1U6 114 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A10PA6NDY2 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A18PA6NE21 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A16PA6NEW6 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 GAGE10A6NGK3 116 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 OOEPA6NGQ2 149 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A20PA6NIJ5 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A8PA6NJQ4 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A7PA6NKC0 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A22PA8MWA6 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A12PA8MX19 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A5PA8MXJ8 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A23PA8MXZ1 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FOXS1O43638 330 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A15PP0C7V4 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A13PP0C7W8 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A14PP0C7W9 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A24PP0C7X0 464 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 DMRTA1Q5VZB9 504 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 C1QL4Q86Z23 238 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 RFESDQ8TAC1 157 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 SSMEM1Q8WWF3 244 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 WFIKKN1Q96NZ8 548 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 RBKSQ9H477 322 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 PILRAQ9UKJ1 303 aa13.75□□□□□ -0.21
SMC4-204ENST00000462787 CD5P06127 495 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 MPZP25189 248 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 PRSS12P56730 875 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 CTHRC1Q96CG8 243 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 ADTRPQ96IZ2 230 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 PARLQ9H300 379 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 DECR2Q9NUI1 292 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 ANKRD31Q8N7Z5 1873 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 FAM90A26D6RGX4 464 aa13.74□□□□□ -0.21
SMC4-204ENST00000462787 RHBDL1O75783 438 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms