RNA–Protein interactions for RNA: ENST00000462673.1

USP4-207, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 709 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-207ENST00000462673 RHEBQ15382 184 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CNN3Q15417 329 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 ODF4Q2M2E3 257 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CEACAM21Q3KPI0 293 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 FAM76BQ5HYJ3 339 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 C1orf100Q5SVJ3 147 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZNF600Q6ZNG1 722 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 KCTD9Q7L273 389 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ANGPTL5Q86XS5 388 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZNF573Q86YE8 665 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZDHHC23Q8IYP9 409 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZCCHC24Q8N2G6 241 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 ARRDC1Q8N5I2 433 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 JAGN1Q8N5M9 183 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 ZSCAN4Q8NAM6 433 aaPredicted RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 OR56B2PQ8NGI1 322 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 OR10R2Q8NGX6 335 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 MALSU1Q96EH3 234 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 SEC22AQ96IW7 307 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 FAM71F1Q96KD3 344 aaPredicted RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 Q96MF0 132 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 OR2V2Q96R30 315 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 OCSTAMPQ9BR26 566 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 SELENOIQ9C0D9 397 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 TMEM231Q9H6L2 316 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 G6PC2Q9NQR9 355 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 CYTL1Q9NRR1 136 aa6.57□□□□□ -1.36
USP4-207ENST00000462673 FLNBO75369 2602 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 YLPM1P49750 1951 aaKnown RBP6.57□□□□□ -1.36
USP4-207ENST00000462673 ABCA4P78363 2273 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 DCHS2Q6V1P9 2916 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 OR5B21A6NL26 309 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 RNASEK-C17orf49H0YIS7 233 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 P2RY10O00398 339 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 SRSF10O75494 262 aaKnown RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 HTR3BO95264 441 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 CSTBP04080 98 aaKnown RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 GAPDHP04406 335 aaKnown RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 GSTP1P09211 210 aaKnown RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 CD37P11049 281 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 CCL1P22362 96 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 USF1P22415 310 aaPredicted RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 HRH1P35367 487 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 GATA4P43694 442 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 PPT1P50897 306 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 FUT6P51993 359 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 RAB2AP61019 212 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 GNG3P63215 75 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 PRDX4Q13162 271 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 FAM189A2Q15884 450 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 MSMPQ1L6U9 139 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 ZNF260Q3ZCT1 412 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 AWAT1Q58HT5 328 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 TMEM128Q5BJH2 165 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 Q6ZSR3 168 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 HOGA1Q86XE5 327 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 ZNF525Q8N782 197 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 C10orf105Q8TEF2 133 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 MEGF10Q96KG7 1140 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 C18orf12Q96KH6 178 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 SULT4A1Q9BR01 284 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 HRH4Q9H3N8 390 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 TMPRSS5Q9H3S3 457 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 TUBA4BQ9H853 241 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 GCM1Q9NP62 436 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 TMEM106BQ9NUM4 274 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 ZNF319Q9P2F9 582 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 RNF7Q9UBF6 113 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 FBLN5Q9UBX5 448 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 ANAPC10Q9UM13 185 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 POLDIP2Q9Y2S7 368 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 FAM96BQ9Y3D0 163 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 V9GYS6 101 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 RAI1Q7Z5J4 1906 aaPredicted RBP6.56□□□□□ -1.36
USP4-207ENST00000462673 CENPEQ02224 2701 aa6.56□□□□□ -1.36
USP4-207ENST00000462673 UNC79Q9P2D8 2635 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 PPIAL4EA0A075B759 164 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 TRAV38-1A0A0B4J264 116 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 C13orf42A0A1B0GVH6 325 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 A6NLC8 198 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 ZNF850A8MQ14 1090 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 PPIAL4DF5H284 164 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 CDC14BO60729 498 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 NDUFS7O75251 213 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 SFT2D2O95562 160 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 IFNA17P01571 189 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 IGLV3-1P01715 115 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 CD5P06127 495 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 GRPP07492 148 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 FAM157CP0CG43 387 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 PPIAL4FP0DN26 164 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 AKR1C4P17516 323 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 COL8A2P25067 703 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 NFYBP25208 207 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 ECI1P42126 302 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 LPAR6P43657 344 aa6.55□□□□□ -1.36
USP4-207ENST00000462673 SRSF3P84103 164 aaKnown RBP6.55□□□□□ -1.36
USP4-207ENST00000462673 LOXL1Q08397 574 aaPredicted RBP6.55□□□□□ -1.36
USP4-207ENST00000462673 MFGE8Q08431 387 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms