RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 GINS4Q9BRT9 223 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 MMP28Q9H239 520 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 MBNL3Q9NUK0 354 aaKnown RBP12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 SLC2A8Q9NY64 477 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 KAAG1Q9UBP8 84 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 PCDHB10Q9UN67 800 aa12.61□□□□□ -0.39
TMEM39A-203ENST00000461654 CSPG4Q6UVK1 2322 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 TRGV10A0A0A0MS01 117 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 VWC2LB2RUY7 222 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 SPINT2O43291 252 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 NDUFB6O95139 128 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 DHFRP00374 187 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 RPS2P15880 293 aaKnown RBP12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 GZMHP20718 246 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 SCGB3A2Q96PL1 93 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 TAF9BQ9HBM6 251 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 NUDT15Q9NV35 164 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 LPAR3Q9UBY5 353 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 MIOXQ9UGB7 285 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 HIVEP2P31629 2446 aa12.6□□□□□ -0.39
TMEM39A-203ENST00000461654 NAV3Q8IVL0 2385 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 ARFGEF3Q5TH69 2177 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TRAV6A0A075B6T7 132 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TRAV39A0A0B4J263 110 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 hADV38S2A0JD32 116 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 INMT-MINDY4F8WBC2 141 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TNFRSF13BO14836 293 aaPredicted RBP12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 BET1O15155 118 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 DIRAS3O95661 229 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 SCTP09683 121 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 H2AFB2P0C5Z0 115 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 SELLP14151 372 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 IL2RGP31785 369 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 ECI1P42126 302 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 PDLIM4P50479 330 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 HMGN3Q15651 99 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 LYPD2Q6UXB3 125 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 GLCCI1Q86VQ1 547 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 PRIMA1Q86XR5 153 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 PRR18Q8N4B5 295 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TPRX1Q8N7U7 411 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 OR8B3Q8NGG8 313 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 OR10J5Q8NHC4 309 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TERB2Q8NHR7 220 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 MRGPRDQ8TDS7 321 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 GALMQ96C23 342 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 OR8B2Q96RD0 313 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 ZNF2Q9BSG1 426 aaPredicted RBP12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 MARVELD1Q9BSK0 173 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 C20orf85Q9H1P6 137 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 CR1P17927 2039 aa12.59□□□□□ -0.39
TMEM39A-203ENST00000461654 TANC2Q9HCD6 1990 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 CEACAM18A8MTB9 384 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 DVL1O14640 695 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 GPR37O15354 613 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 HSPA12AO43301 675 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 RLN1P04808 185 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 USF1P22415 310 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 FCGR2CP31995 323 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 RAG2P55895 527 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 HERV-K104P61576 105 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 MEF2CQ06413 473 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 TMEM249Q2WGJ8 235 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 Q6ZPA2 131 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 IL1F10Q8WWZ1 152 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 H1FXQ92522 213 aaKnown RBP12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 ARL11Q969Q4 196 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 KIRREL1Q96J84 757 aa12.58□□□□□ -0.4
TMEM39A-203ENST00000461654 A0A1B0GW55 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 FAM172BPA6NC97 362 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 C12orf77C9JDV5 145 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 ARPC1BO15143 372 aaKnown RBP12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L2P0CJ85 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L3P0CJ86 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L4P0CJ87 422 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L5P0CJ88 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L6P0CJ89 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L7P0CJ90 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4L9Q6RFH8 374 aaPredicted RBP12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DHRS11Q6UWP2 260 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 ZDHHC22Q8N966 263 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 OR13A1Q8NGR1 328 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 GIMAP1Q8WWP7 306 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 CABLES2Q9BTV7 478 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 DUX4Q9UBX2 424 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 ZANQ9Y493 2812 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 ABCA2Q9BZC7 2435 aa12.57□□□□□ -0.4
TMEM39A-203ENST00000461654 hCG_2014768A0A024R1R8 64 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 TRBV6-7A0A0A0MS04 114 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 TRBV23-1A0A0A0MS06 115 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 A8MV72 311 aaPredicted RBP12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 PEX14O75381 377 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 HBZP02008 142 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 PGAM2P15259 253 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 ZBTB25P24278 435 aa12.56□□□□□ -0.4
TMEM39A-203ENST00000461654 NPY4RP50391 375 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms