RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 CHRFAM7AQ494W8 412 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 TMEM69Q5SWH9 247 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 C6orf183Q5T699 404 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 NCR3LG1Q68D85 454 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 TRAT1Q6PIZ9 186 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 BRD3OSQ6XYD6 125 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 BCL6BQ8N143 479 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-202ENST00000461433 TEX29Q8N6K0 151 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 OR10A7Q8NGE5 316 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 OR1L1Q8NH94 360 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 MCFD2Q8NI22 146 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 NUDCD2Q8WVJ2 157 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 AJUBAQ96IF1 538 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 TMEM133Q9H2Q1 129 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 HEXA-AS1Q9H8Q6 139 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF69Q9UC07 566 aa9.19□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF230Q9UIE0 474 aaPredicted RBP9.19□□□□□ -0.94
SSBP1-202ENST00000461433 IGKV1D-8A0A087WSZ0 117 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 FAM172BPA6NC97 362 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 RGS5O15539 181 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 COX7A1P24310 79 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 FPR2P25090 351 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 CD34P28906 385 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 SRP14P37108 136 aaKnown RBP9.18□□□□□ -0.94
SSBP1-202ENST00000461433 GPR157Q5UAW9 335 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 OR52W1Q6IF63 320 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 C9orf139Q6ZV77 190 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 MOB1BQ7L9L4 216 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 OR11H6Q8NGC7 330 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 SETD6Q8TBK2 473 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 SUCNR1Q9BXA5 334 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF286AQ9HBT8 521 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 KCNIP1Q9NZI2 227 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 A3GALT2U3KPV4 340 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 CUBNO60494 3623 aa9.18□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV2-26A0A0B4J1V2 119 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PRD5 423 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PRF3 423 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 A0A1W2PRM7 423 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 MEIOCA2RUB1 952 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 ODF3BA8MYP8 253 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 FAM25AB3EWG3 89 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 FAM25CB3EWG5 89 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 FAM25GB3EWG6 89 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 SPINT2O43291 252 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 SCTP09683 121 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 SRD5A1P18405 259 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 DTYMKP23919 212 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 NFYBP25208 207 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 MNDAP41218 407 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 PITPNAQ00169 270 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 GUCA2AQ02747 115 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 MADCAM1Q13477 382 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 SRSF7Q16629 238 aaKnown RBP eCLIP9.17□□□□□ -0.94
SSBP1-202ENST00000461433 LTC4SQ16873 150 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 LDLRAD2Q5SZI1 272 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 ZNF626Q68DY1 528 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 CNIH2Q6PI25 160 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 Q6ZS49 121 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 PRR18Q8N4B5 295 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 OR52M1Q8NGK5 317 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 MAFIPQ8WZ33 124 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 GCDHQ92947 438 aaPredicted RBP9.17□□□□□ -0.94
SSBP1-202ENST00000461433 LEAP2Q969E1 77 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 C6orf62Q9GZU0 229 aaPredicted RBP9.17□□□□□ -0.94
SSBP1-202ENST00000461433 MMP27Q9H306 513 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 BATF3Q9NR55 127 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 GFOD1Q9NXC2 390 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 EXTL2Q9UBQ6 330 aa9.17□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV3-43A0A0B4J1X8 118 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 IGKV1-6A0A0C4DH72 117 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 TRDCB7Z8K6 153 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 SDCBPO00560 298 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-202ENST00000461433 NPFFO15130 113 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 IGLV1-47P01700 117 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV3-7P01780 117 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 FAM157CP0CG43 387 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 IGHV3-43DP0DP04 118 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 EPHA1P21709 976 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 TNFSF8P32971 234 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 GNG2P59768 71 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 BPIFB3P59826 476 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 HLA-DRB3P79483 266 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 MRPS15P82914 257 aaKnown RBP9.16□□□□□ -0.94
SSBP1-202ENST00000461433 HTD2P86397 168 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 HERPUD1Q15011 391 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 ABHD12Q8N2K0 398 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 OR52L2PQ8NGH6 319 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 OR13D1Q8NGV5 346 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 C22orf15Q8WYQ4 148 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 ABHD1Q96SE0 405 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 OCSTAMPQ9BR26 566 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 CLEC7AQ9BXN2 247 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 ZNRD1Q9P1U0 126 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 MGAT4AQ9UM21 535 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 NIPBLQ6KC79 2804 aaeCLIP9.16□□□□□ -0.94
SSBP1-202ENST00000461433 NAV3Q8IVL0 2385 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 GSTT2P0CG29 244 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 GSTT2BP0CG30 244 aa9.16□□□□□ -0.94
SSBP1-202ENST00000461433 SAA4P35542 130 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms