RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 IGHV3-43DP0DP04 118 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 MYL9P24844 172 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 CD24P25063 80 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 RPS27AP62979 156 aaKnown RBP12.36□□□□□ -0.43
VARS-219ENST00000461328 EMX1Q04741 257 aaPredicted RBP12.36□□□□□ -0.43
VARS-219ENST00000461328 MADCAM1Q13477 382 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 SSX1Q16384 188 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 C2orf68Q2NKX9 166 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 TRAT1Q6PIZ9 186 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 KLHDC1Q8N7A1 406 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 NDUFB11Q9NX14 153 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 GNG12Q9UBI6 72 aa12.36□□□□□ -0.43
VARS-219ENST00000461328 C12orf77C9JDV5 145 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 C15orf65H3BRN8 121 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 PEX14O75381 377 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 TSPAN15O95858 294 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 VSIG10L2P0DP72 767 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 ARSBP15848 533 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 RANBP1P43487 201 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 SIGIRRQ6IA17 410 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 SLC16A12Q6ZSM3 486 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 FCGR1BQ92637 280 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 AKR1E2Q96JD6 320 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 NICN1Q9BSH3 213 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 URM1Q9BTM9 101 aaKnown RBP12.35□□□□□ -0.43
VARS-219ENST00000461328 YTHDF1Q9BYJ9 559 aaKnown RBP12.35□□□□□ -0.43
VARS-219ENST00000461328 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 ZNF702PQ9H963 129 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 CHMP1AQ9HD42 196 aaPredicted RBP12.35□□□□□ -0.43
VARS-219ENST00000461328 KCNIP1Q9NZI2 227 aa12.35□□□□□ -0.43
VARS-219ENST00000461328 TMEM14DPA8MWL7 114 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 CCRL2O00421 344 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 PDCD5O14737 125 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 IL3RAP26951 378 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 CHATP28329 748 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 PSMD7P51665 324 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 CLDN12P56749 244 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 UNC119Q13432 240 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
VARS-219ENST00000461328 OR2W3Q7Z3T1 314 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 SPARTQ8N0X7 666 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 OR10V1Q8NGI7 309 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 OR52M1Q8NGK5 317 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 OR1L1Q8NH94 360 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 GFI1Q99684 422 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 SLC25A33Q9BSK2 321 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 GFOD1Q9NXC2 390 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 V9GY05 133 aa12.34□□□□□ -0.43
VARS-219ENST00000461328 LY6LH3BQJ8 138 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 WIPF1O43516 503 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 HBZP02008 142 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 CSF1P09603 554 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 RCC1P18754 421 aaPredicted RBP12.33□□□□□ -0.44
VARS-219ENST00000461328 BLVRBP30043 206 aaPredicted RBP12.33□□□□□ -0.44
VARS-219ENST00000461328 RAB7AP51149 207 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 HES1Q14469 280 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 TMEM30BQ3MIR4 351 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 HES5Q5TA89 166 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 UBE2UQ5VVX9 321 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 ZNF773Q6PK81 442 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 C16orf82Q7Z2V1 217 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 C6orf201Q7Z4U5 140 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 OR51D1Q8NGF3 324 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 OR56B4Q8NH76 319 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 FAM110DQ8TAY7 271 aaPredicted RBP12.33□□□□□ -0.44
VARS-219ENST00000461328 SETD6Q8TBK2 473 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 MRPL30Q8TCC3 161 aaKnown RBP12.33□□□□□ -0.44
VARS-219ENST00000461328 CYYR1Q96J86 154 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 SULT4A1Q9BR01 284 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 TM2D1Q9BX74 207 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 TAF9BQ9HBM6 251 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 PLEKHJ1Q9NW61 149 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 LRRC42Q9Y546 428 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 TRRAPQ9Y4A5 3859 aa12.33□□□□□ -0.44
VARS-219ENST00000461328 HSD17B6O14756 317 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 FAM106CPP0CH98 169 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 VDAC2P45880 294 aaPredicted RBP12.32□□□□□ -0.44
VARS-219ENST00000461328 REG1BP48304 166 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 QRFPP83859 136 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 DEFA6Q01524 100 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 OR8H3Q8N146 312 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 GAPTQ8N292 157 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 Q8N2B8 174 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 DRAM1Q8N682 238 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 FAM3DQ96BQ1 224 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 FAAP24Q9BTP7 215 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 LIN7BQ9HAP6 207 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 SERTAD4Q9NUC0 356 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 STEAP1Q9UHE8 339 aa12.32□□□□□ -0.44
VARS-219ENST00000461328 TET2Q6N021 2002 aaPredicted RBP12.32□□□□□ -0.44
VARS-219ENST00000461328 TRDV1A0A1B0GX56 115 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 A0A1W2PPI3 338 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 KCNAB3O43448 404 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 OR2F2O95006 317 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 SNRNP70P08621 437 aaKnown RBP12.31□□□□□ -0.44
VARS-219ENST00000461328 CD37P11049 281 aa12.31□□□□□ -0.44
VARS-219ENST00000461328 OR10A3P58181 314 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms