RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 CROCCP3Q8IVE0 287 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 GAPTQ8N292 157 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 OR52M1Q8NGK5 317 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 OR4K15Q8NH41 348 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 LINC01006Q8NI28 216 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 RFESDQ8TAC1 157 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 NDNFQ8TB73 568 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 KIRREL1Q96J84 757 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SULT4A1Q9BR01 284 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 CENPOQ9BU64 300 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 C16orf95Q9H693 158 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 CHMP1AQ9HD42 196 aaPredicted RBP10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 DAPK2Q9UIK4 370 aa10.73□□□□□ -0.69
RAB11FIP3-207ENST00000461009 A0A087X0M5 115 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 TRAV39A0A0B4J263 110 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 A0A1B0GX30 115 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SMIM30A4D0T7 59 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 LEUTXA8MZ59 168 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SOCS1O15524 211 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SLC2A2P11168 524 aaPredicted RBP10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SSTR5P35346 364 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ARL6IP1Q15041 203 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 TMEM30BQ3MIR4 351 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SFXN4Q6P4A7 337 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ZNF554Q86TJ5 538 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 OR13F1Q8NGS4 319 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 OR9G1Q8NH87 305 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SSX3Q99909 188 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 CITED1Q99966 193 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 RNF167Q9H6Y7 350 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 DPM3Q9P2X0 92 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 MGAT4AQ9UM21 535 aa10.72□□□□□ -0.69
RAB11FIP3-207ENST00000461009 A0A0A6YYD4 124 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 C15orf65H3BRN8 121 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 H3BUX3 64 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SDCBPO00560 298 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 TSPAN9O75954 239 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 GDNFP39905 211 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ARHGDIBP52566 201 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SCAND1P57086 179 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 MRPS15P82914 257 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 SSX2Q16385 188 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 LTC4SQ16873 150 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 IDNKQ5T6J7 187 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 C11orf88Q6PI97 169 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 Q6ZSV7 163 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 MOB1BQ7L9L4 216 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 LHFPL4Q7Z7J7 247 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 NR2C2APQ86WQ0 139 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 OR10R2Q8NGX6 335 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 MRPL30Q8TCC3 161 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 RAB3CQ96E17 227 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 FUNDC2Q9BWH2 189 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 PECRQ9BY49 303 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ATG5Q9H1Y0 275 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ZNF286AQ9HBT8 521 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ABCB10Q9NRK6 738 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 MBNL3Q9NUK0 354 aaKnown RBP10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 ABRACLQ9P1F3 81 aa10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 AMMECR1Q9Y4X0 333 aaPredicted RBP10.71□□□□□ -0.69
RAB11FIP3-207ENST00000461009 FAM172BPA6NC97 362 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 J3QR06 171 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 F2RL2O00254 374 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 SCGNO76038 276 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 HBZP02008 142 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 CLEC2LP0C7M8 214 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 SMIM18P0DKX4 95 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 RCC1P18754 421 aaPredicted RBP10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 TMEM50BP56557 158 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 LSM3P62310 102 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 SRSF4Q08170 494 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 HLA-DRB5Q30154 266 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 Q3ZCU0 254 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 BAIAP2L2Q6UXY1 529 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 LIAT1Q6ZQX7 453 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 OR4C13Q8NGP0 309 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 C17orf50Q8WW18 174 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 PHF21AQ96BD5 680 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 GALMQ96C23 342 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 AJUBAQ96IF1 538 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 ARHGAP5-AS1Q96IT6 56 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 CMSS1Q9BQ75 279 aaKnown RBP10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 MMP27Q9H306 513 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 TAF9BQ9HBM6 251 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 GFOD1Q9NXC2 390 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 AK3Q9UIJ7 227 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 HILPDAQ9Y5L2 63 aa10.7□□□□□ -0.7
RAB11FIP3-207ENST00000461009 TRBV6-6A0A0A6YYG2 114 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 A0A0B4J203 849 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 FOXI3A8MTJ6 420 aaPredicted RBP10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 VGLL3A8MV65 326 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 OOSP1A8MZH6 123 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 C12orf77C9JDV5 145 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 BUB1B-PAK6H3BSN5 160 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 IGLV1-47P01700 117 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 CD3GP09693 182 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 SNRPBP14678 240 aaKnown RBP10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 EFNB2P52799 333 aa10.69□□□□□ -0.7
RAB11FIP3-207ENST00000461009 PROK1P58294 105 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms