RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 IZUMO1Q8IYV9 350 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 ABHD12Q8N2K0 398 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 PRR18Q8N4B5 295 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 SAMD12Q8N8I0 201 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 DTX3Q8N9I9 347 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 SETD6Q8TBK2 473 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 ZNF418Q8TF45 676 aaPredicted RBP11.37□□□□□ -0.59
HDLBP-229ENST00000460826 KCTD12Q96CX2 325 aaKnown RBP11.37□□□□□ -0.59
HDLBP-229ENST00000460826 BCL7BQ9BQE9 202 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 CLEC7AQ9BXN2 247 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 RBM38Q9H0Z9 239 aaKnown RBP11.37□□□□□ -0.59
HDLBP-229ENST00000460826 PRDM13Q9H4Q3 707 aa11.37□□□□□ -0.59
HDLBP-229ENST00000460826 A0A087X0M5 115 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 A0A1B0GX30 115 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 CD3GP09693 182 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 LOXL3P58215 753 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 HILS1P60008 231 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 HMGN3Q15651 99 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 ZNF260Q3ZCT1 412 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 MIDNQ504T8 468 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 DYNAPQ8N1N2 210 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 ZDHHC22Q8N966 263 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 OR10A7Q8NGE5 316 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 OR4P4Q8NGL7 312 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 ABCG5Q9H222 651 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 C12orf4Q9NQ89 552 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 GFOD1Q9NXC2 390 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 KCNIP1Q9NZI2 227 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 COMMD3Q9UBI1 195 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 COL6A5A8TX70 2615 aa11.36□□□□□ -0.59
HDLBP-229ENST00000460826 FBN1P35555 2871 aaKnown RBP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 TRAV18A0A075B6X5 111 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 A0A1W2PPE3 182 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 TMEM235A6NFC5 223 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 SDCBPO00560 298 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 SPINT2O43291 252 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 TCF21O43680 179 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 IGLV1-47P01700 117 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 EIF4EP06730 217 aaKnown RBP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 MELTFP08582 738 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 ZNF182P17025 639 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 LGALS4P56470 323 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 GNMTQ14749 295 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 UBE2NLQ5JXB2 153 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 TRAT1Q6PIZ9 186 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 Q6YL49 198 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 MOB1BQ7L9L4 216 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 DYNC2LI1Q8TCX1 351 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 NUDCD2Q8WVJ2 157 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 MAFIPQ8WZ33 124 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 DUX5Q96PT3 197 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 RIMS4Q9H426 269 aaPredicted RBP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 Q9N2K0 584 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.35□□□□□ -0.59
HDLBP-229ENST00000460826 PSG11Q9UQ72 335 aa11.35□□□□□ -0.59
HDLBP-229ENST00000460826 DNAJC9-AS1A6NH13 148 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 SERPINE3A8MV23 424 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 SSX5O60225 188 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 NOL3O60936 208 aaKnown RBP11.34□□□□□ -0.59
HDLBP-229ENST00000460826 SCGNO76038 276 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 FCGR3AP08637 254 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 FBP1P09467 338 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 PTHLHP12272 177 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 GNG10P50151 68 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 HLA-DRB3P79483 266 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 BAMBIQ13145 260 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 ARFRP1Q13795 201 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 HLA-DRB5Q30154 266 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 ZNF554Q86TJ5 538 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 OR52L2PQ8NGH6 319 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 OR10V1Q8NGI7 309 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 OR52M1Q8NGK5 317 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 OR9G1Q8NH87 305 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 ACOT12Q8WYK0 555 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 ZDHHC16Q969W1 377 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 ZNF230Q9UIE0 474 aaPredicted RBP11.34□□□□□ -0.59
HDLBP-229ENST00000460826 FAM96BQ9Y3D0 163 aa11.34□□□□□ -0.59
HDLBP-229ENST00000460826 TBL2Q9Y4P3 447 aaKnown RBP11.34□□□□□ -0.59
HDLBP-229ENST00000460826 IGKV1D-8A0A087WSZ0 117 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 CCDC160A6NGH7 325 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 J3QR06 171 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 TOR1AO14656 332 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 SLC31A2O15432 143 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 HOXA3O43365 443 aaPredicted RBP11.33□□□□□ -0.6
HDLBP-229ENST00000460826 HPGDSO60760 199 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 IGHV4-59P01825 116 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 GSTP1P09211 210 aaKnown RBP11.33□□□□□ -0.6
HDLBP-229ENST00000460826 SCTP09683 121 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 ELK1P19419 428 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 ARL6IP1Q15041 203 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 SLC9A3R2Q15599 337 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 HACD4Q5VWC8 232 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 RBMS3Q6XE24 437 aaKnown RBP11.33□□□□□ -0.6
HDLBP-229ENST00000460826 LDLRAD3Q86YD5 345 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 ZNF439Q8NDP4 499 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 BEND2Q8NDZ0 799 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 PHF21AQ96BD5 680 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 AUNIPQ9H7T9 357 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 DIABLOQ9NR28 239 aa11.33□□□□□ -0.6
HDLBP-229ENST00000460826 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms