RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731		Q6ZTK2	550 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	TCF23	Q7RTU1	214 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	FGFRL1	Q8N441	504 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	KIR3DL3	Q8N743	410 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	BOLL	Q8N9W6	283 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	PPP1R35	Q8TAP8	253 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	PLPPR1	Q8TBJ4	325 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	TNFRSF14	Q92956	283 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	FAM46B	Q96A09	425 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	S100A16	Q96FQ6	103 aa	Known RBP	4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	ARHGAP5-AS1	Q96IT6	56 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	SULT4A1	Q9BR01	284 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	TOLLIP	Q9H0E2	274 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	KCNK15	Q9H427	330 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	ELL3	Q9HB65	397 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	TMEM160	Q9NX00	188 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	TAS2R3	Q9NYW6	316 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	RABL2A	Q9UBK7	228 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	LPAR3	Q9UBY5	353 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	CLN8	Q9UBY8	286 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	ANAPC10	Q9UM13	185 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	RABL2B	Q9UNT1	228 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	UBE2J1	Q9Y385	318 aa	Predicted RBP	4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	INSIG2	Q9Y5U4	225 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	PEX16	Q9Y5Y5	336 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	LINC00312	Q9Y6C7	94 aa		4.62	□□□□□ -1.67
PTPN12-209	ENST00000460731	ANK3	Q12955	4377 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731		A0A087X0M5	115 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731		A0A1B0GX30	115 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ODAM	A1E959	279 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ISPD	A4D126	451 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	C15orf65	H3BRN8	121 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731		M0R1W7	72 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CTDSPL	O15194	276 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PHF1	O43189	567 aa	Predicted RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ENSA	O43768	121 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CD5L	O43866	347 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ORC5	O43913	435 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	NOL3	O60936	208 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CLPX	O76031	633 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	EIF4E	P06730	217 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	VSIG10L2	P0DP72	767 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ZNF44	P15621	663 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	NAT1	P18440	290 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PRTN3	P24158	256 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CDK2	P24941	298 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PTBP1	P26599	531 aa	Known RBP eCLIP	4.61	□□□□□ -1.67	4e-6	■□□□□ 11.3
PTPN12-209	ENST00000460731	CD34	P28906	385 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	TNFSF8	P32971	234 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	GLIPR1	P48060	266 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	VEGFC	P49767	419 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	GMFB	P60983	142 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	GNB2	P62879	340 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	RPL31	P62899	125 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PITPNA	Q00169	270 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	AES	Q08117	197 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PDCD1	Q15116	288 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	GRK1	Q15835	563 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CDNF	Q49AH0	187 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PAN3	Q58A45	887 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CYB5R2	Q6BCY4	276 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	HEPN1	Q6WQI6	88 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	BTN2A1	Q7KYR7	527 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	C6orf201	Q7Z4U5	140 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CCDC190	Q86UF4	302 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	BATF2	Q8N1L9	274 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731		Q8N7P7	452 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	SAMD12	Q8N8I0	201 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	ZNF565	Q8N9K5	539 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	OR10A7	Q8NGE5	316 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	OR52M1	Q8NGK5	317 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	OR6Q1	Q8NGQ2	317 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	MRPL30	Q8TCC3	161 aa	Known RBP	4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	DYRK2	Q92630	601 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	TMEM186	Q96B77	213 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	UPRT	Q96BW1	309 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	RAB3C	Q96E17	227 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CYYR1	Q96J86	154 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	NEDD4L	Q96PU5	975 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	FAAP24	Q9BTP7	215 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PECR	Q9BY49	303 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	CHST6	Q9GZX3	395 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	SIRPD	Q9H106	197 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	AUNIP	Q9H7T9	357 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	DIABLO	Q9NR28	239 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	MMP26	Q9NRE1	261 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	C19orf12	Q9NSK7	152 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	PLEKHJ1	Q9NW61	149 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	OR6C3	Q9NZP0	311 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	OR14J1	Q9UGF5	321 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	KPTN	Q9Y664	436 aa		4.61	□□□□□ -1.67
PTPN12-209	ENST00000460731	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	hADV38S2	A0JD32	116 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	TMEM30CP	A0ZSE6	113 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	ZNF729	A6NN14	1252 aa	Predicted RBP	4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	SIRPB1	O00241	398 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	SULT1C2	O00338	296 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	SSX5	O60225	188 aa		4.6	□□□□□ -1.67
PTPN12-209	ENST00000460731	HPGDS	O60760	199 aa		4.6	□□□□□ -1.67

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