RNA–Protein interactions for RNA: ENST00000460593.1

CPSF3-202, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 1 (best) BASIC

Gene CPSF3, Length 3,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-202ENST00000460593 OR8G2PQ6IF36 304 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 OXGR1Q96P68 337 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 NAT8Q9UHE5 227 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 NAGKQ9UJ70 344 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 NBEAQ8NFP9 2946 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 FAM186AA6NE01 2351 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 TGOLN2O43493 480 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 LILRA1O75019 489 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 PDCD6O75340 191 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 HPRT1P00492 218 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 PSG2P11465 335 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 HNF1AP20823 631 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 PMP22Q01453 160 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 TMEM240Q5SV17 173 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 TOMM20LQ6UXN7 152 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 GBGT1Q8N5D6 347 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 NEK7Q8TDX7 302 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 NABP1Q96AH0 204 aa10.03□□□□□ -0.8
CPSF3-202ENST00000460593 TRAPPC6AO75865 159 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 NRASP01111 189 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 RPLP1P05386 114 aaKnown RBP10.02□□□□□ -0.8
CPSF3-202ENST00000460593 TCN2P20062 427 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 VDAC1P21796 283 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 EIF3IQ13347 325 aaKnown RBP10.02□□□□□ -0.8
CPSF3-202ENST00000460593 SPANXN5Q5MJ07 72 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 PLCXD3Q63HM9 321 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 RPP25LQ8N5L8 163 aaKnown RBP10.02□□□□□ -0.8
CPSF3-202ENST00000460593 OR10G4Q8NGN3 311 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 DTD1Q8TEA8 209 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 EXTL1Q92935 676 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 KLHDC7BQ96G42 594 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 OR51I2Q9H344 312 aa10.02□□□□□ -0.8
CPSF3-202ENST00000460593 URB1O60287 2271 aaKnown RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 CRYAAP02489 173 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF16P17020 682 aaPredicted RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 BAXQ07812 192 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 SHBQ15464 509 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 SHHQ15465 462 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 HIST3H3Q16695 136 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 ACTL10Q5JWF8 245 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 C1orf194Q5T5A4 169 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 OR10V1Q8NGI7 309 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 OR2T10Q8NGZ9 312 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 MRPL30Q8TCC3 161 aaKnown RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 MS4A10Q96PG2 267 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 PYGO2Q9BRQ0 406 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 CTDSP1Q9GZU7 261 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 CACNG5Q9UF02 275 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 HS3ST3A1Q9Y663 406 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 MTCH2Q9Y6C9 303 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 HRASP01112 189 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 CNN1P51911 297 aaKnown RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 CFHR1Q03591 330 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF92Q03936 586 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 IGFBP7Q16270 282 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 COA6Q5JTJ3 125 aaKnown RBP10.02□□□□□ -0.81
CPSF3-202ENST00000460593 DCAF10Q5QP82 559 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF525Q8N782 197 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 OR4C12Q96R67 309 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 SLC39A9Q9NUM3 307 aa10.02□□□□□ -0.81
CPSF3-202ENST00000460593 TRAV1-1A0A0B4J248 108 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF816-ZNF321PA0A0X1KG74 233 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF320A2RRD8 509 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 TCF21O43680 179 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 GYPAP02724 150 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 COL8A2P25067 703 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 PTGDSP41222 190 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 TNFSF10P50591 281 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 OR5I1Q13606 314 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 CYP2G1PQ6ZSU1 146 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 MRGPRGQ86SM5 289 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 PRR18Q8N4B5 295 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 R3HDM4Q96D70 268 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF845Q96IR2 970 aaPredicted RBP10.01□□□□□ -0.81
CPSF3-202ENST00000460593 IMMP2LQ96T52 175 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 RIMS4Q9H426 269 aaPredicted RBP10.01□□□□□ -0.81
CPSF3-202ENST00000460593 PARD6AQ9NPB6 346 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 OR6C3Q9NZP0 311 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 CRIM1Q9NZV1 1036 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 TMEM210A6NLX4 147 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 KBTBD11O94819 623 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 CDKN1AP38936 164 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 RASL10BQ96S79 203 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 LPAR2Q9HBW0 351 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 PSENENQ9NZ42 101 aa10.01□□□□□ -0.81
CPSF3-202ENST00000460593 PGLYRP1O75594 196 aaPredicted RBP10□□□□□ -0.81
CPSF3-202ENST00000460593 B4GALT1P15291 398 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 IL3RAP26951 378 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 GNG10P50151 68 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 PDLIM4P50479 330 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 RBM11P57052 281 aaKnown RBP10□□□□□ -0.81
CPSF3-202ENST00000460593 MRPS11P82912 194 aaKnown RBP10□□□□□ -0.81
CPSF3-202ENST00000460593 KCNMB1Q16558 191 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 Q6ZS52 159 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 Q6ZVH6 145 aa10□□□□□ -0.81
CPSF3-202ENST00000460593 PNPLA5Q7Z6Z6 429 aaPredicted RBP10□□□□□ -0.81
CPSF3-202ENST00000460593 ZNF611Q8N823 705 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms