RNA–Protein interactions for RNA: ENST00000460573.5

C9orf3-209, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-209ENST00000460573 SAMD12Q8N8I0 201 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 OR52M1Q8NGK5 317 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 RFESDQ8TAC1 157 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 CLEC7AQ9BXN2 247 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 KCNK7Q9Y2U2 307 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 SVEP1Q4LDE5 3571 aa18.31■□□□□ 0.52
C9orf3-209ENST00000460573 IGHV2-26A0A0B4J1V2 119 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 C12orf77C9JDV5 145 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 GSTP1P09211 210 aaKnown RBP18.3■□□□□ 0.52
C9orf3-209ENST00000460573 RCC1P18754 421 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-209ENST00000460573 COX7A1P24310 79 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 LGALS4P56470 323 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 PRB3Q04118 309 aaPredicted RBP18.3■□□□□ 0.52
C9orf3-209ENST00000460573 RUSC1-AS1Q66K80 236 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 ZNF626Q68DY1 528 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 C22orf15Q8WYQ4 148 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 CYYR1Q96J86 154 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 TAF9BQ9HBM6 251 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 COMMD3Q9UBI1 195 aa18.3■□□□□ 0.52
C9orf3-209ENST00000460573 KIAA2026Q5HYC2 2103 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 STAB1Q9NY15 2570 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 A0A075B6Q4 140 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 A0A0A6YYJ9 748 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 F2RL2O00254 374 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 GDNFP39905 211 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 PNLIPRP3Q17RR3 467 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 BCL6BQ8N143 479 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-209ENST00000460573 ABHD12Q8N2K0 398 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 PIP4P2Q8N4L2 257 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 DYNC2LI1Q8TCX1 351 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 SLC6A7Q99884 636 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 PRDM13Q9H4Q3 707 aa18.29■□□□□ 0.52
C9orf3-209ENST00000460573 CCDC59Q9P031 241 aaKnown RBP18.29■□□□□ 0.52
C9orf3-209ENST00000460573 TBL2Q9Y4P3 447 aaKnown RBP18.29■□□□□ 0.52
C9orf3-209ENST00000460573 MEIOCA2RUB1 952 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ODF3BA8MYP8 253 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 HBZP02008 142 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 NFYBP25208 207 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 PRRX1P54821 245 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ACTG1P63261 375 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 PITPNAQ00169 270 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ARFRP1Q13795 201 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 HMGN3Q15651 99 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 CNPY1Q3B7I2 92 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ZNF260Q3ZCT1 412 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 Q3ZCU0 254 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 OLFML2AQ68BL7 652 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 RBMS3Q6XE24 437 aaKnown RBP18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ZNF596Q8TC21 504 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 JMJD8Q96S16 334 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 ZMAT3Q9HA38 289 aaKnown RBP18.28■□□□□ 0.52
C9orf3-209ENST00000460573 FAM96BQ9Y3D0 163 aa18.28■□□□□ 0.52
C9orf3-209ENST00000460573 A0A1W2PRD5 423 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 A0A1W2PRF3 423 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 A0A1W2PRM7 423 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 XRCC3O43542 346 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 APOA1P02647 267 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 ARG1P05089 322 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 SAA4P35542 130 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 TALDO1P37837 337 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 HTD2P86397 168 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 SRSF7Q16629 238 aaKnown RBP eCLIP18.27■□□□□ 0.524e-7■■■■□ 23.7
C9orf3-209ENST00000460573 HACD4Q5VWC8 232 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 C12orf54Q6X4T0 127 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 OR9G1Q8NH87 305 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 SETD6Q8TBK2 473 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 HDHD3Q9BSH5 251 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-209ENST00000460573 Q9N2K0 584 aa18.27■□□□□ 0.52
C9orf3-209ENST00000460573 TRAV18A0A075B6X5 111 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 A0A0U1RQK1 487 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 SDCBPO00560 298 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-209ENST00000460573 TOR1AO14656 332 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 FBP1P09467 338 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 MINOS1Q5TGZ0 78 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 PRR18Q8N4B5 295 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 BEND2Q8NDZ0 799 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 CREB3L1Q96BA8 519 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 GALMQ96C23 342 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 ZNF286AQ9HBT8 521 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 GFOD1Q9NXC2 390 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 MINOS1-NBL1R4GNA1 71 aa18.26■□□□□ 0.51
C9orf3-209ENST00000460573 MELTFP08582 738 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 FCGR3AP08637 254 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 DTYMKP23919 212 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 LOXL3P58215 753 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 GNG2P59768 71 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 LTC4SQ16873 150 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 DEFB112Q30KQ8 113 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 BAIAP2L2Q6UXY1 529 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 C8orf31Q8N9H6 132 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 OR1L1Q8NH94 360 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 ZDHHC16Q969W1 377 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 PTTG2Q9NZH5 202 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 JPT1Q9UK76 154 aa18.25■□□□□ 0.51
C9orf3-209ENST00000460573 TMEM235A6NFC5 223 aa18.24■□□□□ 0.51
C9orf3-209ENST00000460573 TRIM77I1YAP6 450 aa18.24■□□□□ 0.51
C9orf3-209ENST00000460573 VENTXO95231 258 aa18.24■□□□□ 0.51
C9orf3-209ENST00000460573 IGLV1-47P01700 117 aa18.24■□□□□ 0.51
C9orf3-209ENST00000460573 MNDAP41218 407 aa18.24■□□□□ 0.51
C9orf3-209ENST00000460573 KIR2DS4P43632 304 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms