RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 HSD17B10Q99714 261 aaKnown RBP12.8□□□□□ -0.36
PTPRU-205ENST00000460170 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 ABCA7Q8IZY2 2146 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 LTBRP36941 435 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 AESQ08117 197 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 GABRA6Q16445 453 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 FAM162BQ5T6X4 162 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 OR10C1Q96KK4 312 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 CLCF1Q9UBD9 225 aa12.8□□□□□ -0.36
PTPRU-205ENST00000460170 MFSD2BA6NFX1 497 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 Q96M66 194 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM222Q9H0R3 208 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 CRYM-AS1A6NIL9 109 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 PITX3O75364 302 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 CLEC3BP05452 202 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 G6PCP35575 357 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 HFEQ30201 348 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 C10orf128Q5T292 105 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 TMEM252Q8N6L7 170 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 B4DEV8 164 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 LYPD3O95274 346 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 CRYBA1P05813 215 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 SCTP09683 121 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 MUC1P15941 1255 aaPredicted RBP12.79□□□□□ -0.36
PTPRU-205ENST00000460170 DLK1P80370 383 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 AQP10Q96PS8 301 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 NPAS1Q99742 590 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 RSRP1Q9BUV0 290 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 DDA1Q9BW61 102 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 MEOX2P50222 304 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 RPL11P62913 178 aaKnown RBP12.79□□□□□ -0.36
PTPRU-205ENST00000460170 MYPOPQ86VE0 399 aaPredicted RBP12.79□□□□□ -0.36
PTPRU-205ENST00000460170 MOB3AQ96BX8 217 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 TIMM9Q9Y5J7 89 aa12.79□□□□□ -0.36
PTPRU-205ENST00000460170 TRAV38-1A0A0B4J264 116 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 H3BQ15 152 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 ZP1P60852 638 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 RPEQ96AT9 228 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SRXN1Q9BYN0 137 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SBF1O95248 1867 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 TPPP2P59282 170 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 ARL16Q0P5N6 197 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 ARTNQ5T4W7 220 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 ETFRF1Q6IPR1 90 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 RNF7Q9UBF6 113 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 PRSS50Q9UI38 385 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SDK2Q58EX2 2172 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SPAARA0A1B0GVQ0 90 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
PTPRU-205ENST00000460170 GNG4P50150 75 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 GUCA2BQ16661 112 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SLC23A3Q6PIS1 610 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 SOSTQ9BQB4 213 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 XKRY2A2RUG3 117 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 TMPRSS2O15393 492 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 EFNB1P98172 346 aa12.78□□□□□ -0.36
PTPRU-205ENST00000460170 H0Y980 276 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 OR1K1Q8NGR3 316 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 MISP3Q96FF7 219 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 NDFIP1Q9BT67 221 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 COLQQ9Y215 455 aaPredicted RBP12.77□□□□□ -0.36
PTPRU-205ENST00000460170 IGKV1D-43A0A0B4J1Z2 117 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 C11orf94C9JXX5 98 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 ZNHIT1O43257 154 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 RAMP1O60894 148 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 VSTM2AQ8TAG5 236 aa12.77□□□□□ -0.36
PTPRU-205ENST00000460170 A0A1W2PN81 502 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 HSBP1O75506 76 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 PPP1CCP36873 323 aaKnown RBP12.77□□□□□ -0.37
PTPRU-205ENST00000460170 FAM214BQ7L5A3 538 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 MMP9P14780 707 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 C1QTNF12Q5T7M4 302 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 ACSM6Q6P461 480 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 OR2T10Q8NGZ9 312 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 OR1A1Q9P1Q5 309 aa12.77□□□□□ -0.37
PTPRU-205ENST00000460170 HKR1P10072 659 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 GAS1P54826 345 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 UCP2P55851 309 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 KRTDAPP60985 99 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 UNC119Q13432 240 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 ZNF273Q14593 569 aa12.76□□□□□ -0.37
PTPRU-205ENST00000460170 SLC35E3Q7Z769 313 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms