RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 NFYAP23511 347 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 COL8A2P25067 703 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 CD34P28906 385 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 GNRHRP30968 328 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 GPR12P47775 334 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 PIGPP57054 158 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 HTD2P86397 168 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 DHODHQ02127 395 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 PAX5Q02548 391 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 FGL1Q08830 312 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 SMCO1Q147U7 214 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 MSMPQ1L6U9 139 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 STUMQ69YW2 141 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 GSG1LQ6UXU4 331 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 GLDNQ6ZMI3 551 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZNF695Q8IW36 515 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 C12orf45Q8N5I9 185 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 CD177Q8N6Q3 437 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR10V1Q8NGI7 309 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 MRPL30Q8TCC3 161 aaKnown RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 ZNF431Q8TF32 576 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 CASTOR1Q8WTX7 329 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 ASB13Q8WXK3 278 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 DYRK2Q92630 601 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 TMEM246Q9BRR3 403 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 SSBP3Q9BWW4 388 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 SUCNR1Q9BXA5 334 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 BEX2Q9BXY8 128 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 FGF23Q9GZV9 251 aaPredicted RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 BEX1Q9HBH7 125 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 MBNL3Q9NUK0 354 aaKnown RBP4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 CACFD1Q9UGQ2 172 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 JPT1Q9UK76 154 aa4.88□□□□□ -1.63
RNU1-88P-201ENST00000459274 DSCAML1Q8TD84 2053 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LOC105371242A0A075B767 164 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TRBV6-7A0A0A0MS04 114 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 PPIAL4CA0A0B4J2A2 164 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 KBTBD11-OT1A0A1B0GTJ5 212 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 FAM25EA8MYX2 175 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 PYCARD-AS1I3L0S3 204 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 HSD17B6O14756 317 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RAB29O14966 203 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 ST8SIA5O15466 376 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 SIAH2O43255 324 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 YPEL1O60688 119 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 FOXH1O75593 365 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TUSC2O75896 110 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 DUS4LO95620 317 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR8U9P0C7N5 309 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TRAPPC2P0DI81 140 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TRAPPC2BP0DI82 140 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 PPIAL4GP0DN37 164 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 EGR1P18146 543 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 CEACAM3P40198 252 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LGALS4P56470 323 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 ERVFRD-1P60508 538 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RRAS2P62070 204 aaPredicted RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TAGLNQ01995 201 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 HMGN3Q15651 99 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LTC4SQ16873 150 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 IGSF11Q5DX21 431 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 FAM201AQ5SY85 155 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 AVPI1Q5T686 147 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 AADACL3Q5VUY0 350 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 THOC7Q6I9Y2 204 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 C11orf71Q6IPW1 123 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 C17orf107Q6ZR85 190 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 KCTD9Q7L273 389 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LYG2Q86SG7 212 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 BIVMQ86UB2 503 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 SLC25A42Q86VD7 318 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LGI3Q8N145 548 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 FAM216BQ8N7L0 139 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TCTEX1D1Q8N7M0 179 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR4D10Q8NGI6 311 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR52M1Q8NGK5 317 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR13C8Q8NGS7 320 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR13D1Q8NGV5 346 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR10X1Q8NGY0 326 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 OR8U1Q8NH10 309 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RFESDQ8TAC1 157 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 PLPPR1Q8TBJ4 325 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 CD300LFQ8TDQ1 290 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RTN4IP1Q8WWV3 396 aaPredicted RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 MOB3AQ96BX8 217 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RRNAD1Q96FB5 475 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 ADTRPQ96IZ2 230 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 DMRTB1Q96MA1 342 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 GAFA1Q96PS6 74 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 YPEL2Q96QA6 119 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 CLCC1Q96S66 551 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 SPIN2AQ99865 258 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 SPIN2BQ9BPZ2 258 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 TMPRSS13Q9BYE2 586 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RANBP3Q9H6Z4 567 aaPredicted RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 HEXA-AS1Q9H8Q6 139 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 PATZ1Q9HBE1 687 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 LIN7CQ9NUP9 197 aaKnown RBP4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 RDH8Q9NYR8 311 aa4.87□□□□□ -1.63
RNU1-88P-201ENST00000459274 CALYQ9NYX4 217 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms