RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 VDAC1P21796 283 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 UCP1P25874 307 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 CD200P41217 278 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PI4KAP42356 2102 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FUT6P51993 359 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TAS2R30P59541 319 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 VAMP2P63027 116 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 HLA-DRB3P79483 266 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PNRC1Q12796 327 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 IL24Q13007 206 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ESPL1Q14674 2120 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 RNPS1Q15287 305 aaKnown RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 ABLIM2Q6H8Q1 611 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 LHFPL4Q7Z7J7 247 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TBC1D26Q86UD7 250 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 WDR5BQ86VZ2 330 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ZNF695Q8IW36 515 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 OR10D4PQ8NGN7 298 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 OR1F12Q8NHA8 337 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PLPPR1Q8TBJ4 325 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 M1APQ8TC57 530 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 IL22RA2Q969J5 263 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PCGF1Q9BSM1 259 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 RPH3ALQ9UNE2 315 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 SLC7A11Q9UPY5 501 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 UBE2J1Q9Y385 318 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 LAMA1P25391 3075 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 hCG_38984A0A1B0GV85 526 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 OR5H1A6NKK0 313 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PRR33A8MZF0 331 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 C2CD4DB7Z1M9 353 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 CYB5BO43169 146 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ADAM20O43506 726 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 TMEM50AO95807 157 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 CYC1P08574 325 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 OMGP23515 440 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 NPBWR2P48146 333 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 RPL23AP62750 156 aaKnown RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 NKX6-1P78426 367 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 CXorf66Q5JRM2 361 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 AKR1C8PQ5T2L2 129 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 FAM90A2PQ658T7 463 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 H1FOOQ8IZA3 346 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 SLC25A45Q8N413 288 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 IL22RA1Q8N6P7 574 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 SUMF1Q8NBK3 374 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 SMRP1Q8NCR6 262 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 PRR7Q8TB68 274 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ABHD5Q8WTS1 349 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ZNF837Q96EG3 531 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 JSRP1Q96MG2 331 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 UCN2Q96RP3 112 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 ATP5SQ99766 215 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 DEFB126Q9BYW3 111 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 CALHM2Q9HA72 323 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 SLC7A10Q9NS82 523 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 C19orf25Q9UFG5 118 aaPredicted RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 RNF115Q9Y4L5 304 aa7.3□□□□□ -1.24
VPS50-208ENST00000458707 YLPM1P49750 1951 aaKnown RBP7.3□□□□□ -1.24
VPS50-208ENST00000458707 IGHV3-15A0A0B4J1V0 119 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 A0A1B0GU03 582 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 TUSC2O75896 110 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 TRGC1P0CF51 173 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 IDH3GP51553 393 aaPredicted RBP7.29□□□□□ -1.24
VPS50-208ENST00000458707 TDGF1P3P51864 188 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 PAX9P55771 341 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 RUNX1Q01196 453 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 ACSF3Q4G176 576 aaPredicted RBP7.29□□□□□ -1.24
VPS50-208ENST00000458707 PRAMEF20Q5VT98 475 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 GFI1BQ5VTD9 330 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 ETFRF1Q6IPR1 90 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 ZNF774Q6NX45 483 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 ZNF818PQ6ZRF7 136 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 CMTM1Q8IZ96 169 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 C1orf87Q8N0U7 546 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 OR5D13Q8NGL4 314 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 FRZBQ92765 325 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 ZNF442Q9H7R0 627 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 TMEM38BQ9NVV0 291 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 CISD1Q9NZ45 108 aaKnown RBP7.29□□□□□ -1.24
VPS50-208ENST00000458707 URGCP-MRPS24S4R325 110 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 CHD8Q9HCK8 2581 aa7.29□□□□□ -1.24
VPS50-208ENST00000458707 TRBV24-1A0A075B6N3 115 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CLDN34H7C241 214 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 DNPH1O43598 174 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZIC3O60481 467 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SCRG1O75711 98 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 DFFBO76075 338 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CST7O76096 145 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 NAPSAO96009 420 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CYB5R3P00387 301 aaPredicted RBP7.28□□□□□ -1.24
VPS50-208ENST00000458707 LCATP04180 440 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CTXN2P0C2S0 81 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 SLC25A6P12236 298 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 MYF5P13349 255 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 LIFP15018 202 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 DSCR4P56555 118 aaPredicted RBP7.28□□□□□ -1.24
VPS50-208ENST00000458707 ZFP36L1Q07352 338 aaKnown RBP7.28□□□□□ -1.24
VPS50-208ENST00000458707 CACNA1EQ15878 2313 aa7.28□□□□□ -1.24
VPS50-208ENST00000458707 CDCP2Q5VXM1 449 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms