RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 SLC17A2O00624 439 aa15.02■□□□□ -0
USP39-209ENST00000458268 PEX14O75381 377 aa15.02■□□□□ -0
USP39-209ENST00000458268 BLVRBP30043 206 aaPredicted RBP15.02■□□□□ -0
USP39-209ENST00000458268 REG1BP48304 166 aa15.02■□□□□ -0
USP39-209ENST00000458268 PROK1P58294 105 aa15.02■□□□□ -0
USP39-209ENST00000458268 PAX5Q02548 391 aa15.02■□□□□ -0
USP39-209ENST00000458268 HES1Q14469 280 aa15.02■□□□□ -0
USP39-209ENST00000458268 C22orf42Q6IC83 251 aa15.02■□□□□ -0
USP39-209ENST00000458268 C5orf24Q7Z6I8 188 aa15.02■□□□□ -0
USP39-209ENST00000458268 SULT4A1Q9BR01 284 aa15.02■□□□□ -0
USP39-209ENST00000458268 FAAP24Q9BTP7 215 aa15.02■□□□□ -0
USP39-209ENST00000458268 KCNIP1Q9NZI2 227 aa15.02■□□□□ -0
USP39-209ENST00000458268 V9GY05 133 aa15.02■□□□□ -0
USP39-209ENST00000458268 FBN3Q75N90 2809 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 C15orf65H3BRN8 121 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 PDCD5O14737 125 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 HBZP02008 142 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 CHATP28329 748 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 OR10A3P58181 314 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 MADCAM1Q13477 382 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 DIAPH2-AS1Q14236 149 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 NEDD8Q15843 81 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 KLHDC1Q8N7A1 406 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 OR10A7Q8NGE5 316 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 OR56B4Q8NH76 319 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 URM1Q9BTM9 101 aaKnown RBP15.01□□□□□ -0.01
USP39-209ENST00000458268 GFOD1Q9NXC2 390 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 LRRC42Q9Y546 428 aa15.01□□□□□ -0.01
USP39-209ENST00000458268 SH2D7A6NKC9 451 aaPredicted RBP15□□□□□ -0.01
USP39-209ENST00000458268 TMEM14DPA8MWL7 114 aa15□□□□□ -0.01
USP39-209ENST00000458268 ORC5O43913 435 aa15□□□□□ -0.01
USP39-209ENST00000458268 MRPS14O60783 128 aaKnown RBP15□□□□□ -0.01
USP39-209ENST00000458268 VEGFCP49767 419 aa15□□□□□ -0.01
USP39-209ENST00000458268 DYNLT3P51808 116 aa15□□□□□ -0.01
USP39-209ENST00000458268 FBLN7Q53RD9 439 aa15□□□□□ -0.01
USP39-209ENST00000458268 C9orf152Q5JTZ5 239 aa15□□□□□ -0.01
USP39-209ENST00000458268 UBE2UQ5VVX9 321 aa15□□□□□ -0.01
USP39-209ENST00000458268 CCDC144NLQ6NUI1 221 aa15□□□□□ -0.01
USP39-209ENST00000458268 MRPL30Q8TCC3 161 aaKnown RBP15□□□□□ -0.01
USP39-209ENST00000458268 FAM3DQ96BQ1 224 aa15□□□□□ -0.01
USP39-209ENST00000458268 SLC25A33Q9BSK2 321 aa15□□□□□ -0.01
USP39-209ENST00000458268 YTHDF1Q9BYJ9 559 aaKnown RBP15□□□□□ -0.01
USP39-209ENST00000458268 PRSS22Q9GZN4 317 aa15□□□□□ -0.01
USP39-209ENST00000458268 RANBP3Q9H6Z4 567 aaPredicted RBP15□□□□□ -0.01
USP39-209ENST00000458268 ZNF702PQ9H963 129 aa15□□□□□ -0.01
USP39-209ENST00000458268 TAF9BQ9HBM6 251 aa15□□□□□ -0.01
USP39-209ENST00000458268 RAB9BQ9NP90 201 aa15□□□□□ -0.01
USP39-209ENST00000458268 PLEKHJ1Q9NW61 149 aa15□□□□□ -0.01
USP39-209ENST00000458268 FBLN5Q9UBX5 448 aa15□□□□□ -0.01
USP39-209ENST00000458268 A0A0A6YYD4 124 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 TIMM23O14925 209 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 SOCS1O15524 211 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 KIR2DS4P43632 304 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 HNF4GQ14541 408 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 TMEM95Q3KNT9 176 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 TRAT1Q6PIZ9 186 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 ZNF773Q6PK81 442 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 OR2W3Q7Z3T1 314 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 MOB3BQ86TA1 216 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 DRAM1Q8N682 238 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 FCGR1BQ92637 280 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 LPAR5Q9H1C0 372 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 LINC00574Q9H8X3 128 aa14.99□□□□□ -0.01
USP39-209ENST00000458268 TET2Q6N021 2002 aaPredicted RBP14.99□□□□□ -0.01
USP39-209ENST00000458268 IGHV3-72A0A0B4J1Y9 119 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 TRDV1A0A1B0GX56 115 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 SHISA3A0PJX4 238 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 LY6LH3BQJ8 138 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 HSD17B6O14756 317 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 SLC31A2O15432 143 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 CA11O75493 328 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 GLAP06280 429 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 SNRNP70P08621 437 aaKnown RBP14.98□□□□□ -0.01
USP39-209ENST00000458268 RAB3BP20337 219 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 IL3RAP26951 378 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 BLCAPP62952 87 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 QRFPP83859 136 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 GNMTQ14749 295 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 C2orf76Q3KRA6 126 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 Q6ZTK2 550 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 OR52L2PQ8NGH6 319 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 IL1F10Q8WWZ1 152 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 CITED1Q99966 193 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 HDHD3Q9BSH5 251 aaPredicted RBP14.98□□□□□ -0.01
USP39-209ENST00000458268 TM2D1Q9BX74 207 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 OR2S2Q9NQN1 319 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 STEAP1Q9UHE8 339 aa14.98□□□□□ -0.01
USP39-209ENST00000458268 A0A075B6Q4 140 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 A0A0B4J203 849 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 PSMD7P51665 324 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 EFNB2P52799 333 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 LOXL3P58215 753 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 PLA2G7Q13093 441 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 Q6ZS46 218 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 OR52M1Q8NGK5 317 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 AKR1E2Q96JD6 320 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 AK3Q9UIJ7 227 aa14.97□□□□□ -0.01
USP39-209ENST00000458268 LOC100506127A0A0U1RQW1 187 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 TMEM272A0A1B0GTI8 110 aa14.96□□□□□ -0.01
USP39-209ENST00000458268 A0A1W2PPI3 338 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms