RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 SIRT7Q9NRC8 400 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 GHRLQ9UBU3 117 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 V9GYS6 101 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 CELSR3Q9NYQ7 3312 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 EML6Q6ZMW3 1958 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 IGLV3-1P01715 115 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 GLI4P10075 376 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF708P17019 499 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 AKR1D1P51857 326 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 SP6Q3SY56 376 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 SPAG16Q8N0X2 631 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 ADAMTS17Q8TE56 1095 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 CHST5Q9GZS9 411 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 PPP1R3CQ9UQK1 317 aa10.13□□□□□ -0.79
SYNE2-207ENST00000458046 LSM5Q9Y4Y9 91 aaKnown RBP10.13□□□□□ -0.79
SYNE2-207ENST00000458046 LOC102725191A0A1B0GVB3 256 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 A0A1W2PPQ1 181 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 RS1O15537 224 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PATE4P0C8F1 98 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PET100P0DJ07 73 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 RPL12P30050 165 aaKnown RBP10.12□□□□□ -0.79
SYNE2-207ENST00000458046 RPL35P42766 123 aaKnown RBP10.12□□□□□ -0.79
SYNE2-207ENST00000458046 AKIRIN2Q53H80 203 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PP6455Q8WZ26 134 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 DYRK2Q92630 601 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 TOMM40LQ969M1 308 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 C20orf24Q9BUV8 137 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 LIME1Q9H400 295 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 C1orf123Q9NWV4 160 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 SLC45A2Q9UMX9 530 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PRELID3BQ9Y3B1 194 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 ADAMTS9Q9P2N4 1935 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 LY6G6EA0A0G2JKS1 128 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 TNFSF11O14788 317 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 MSTNO14793 375 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PPT1P50897 306 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 TNXAQ16473 311 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF239Q16600 458 aaKnown RBP10.12□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF528Q3MIS6 628 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 C10orf91Q5T1B1 145 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 SGPP2Q8IWX5 399 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 C1orf87Q8N0U7 546 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 SPEM1Q8N4L4 309 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 SUMF1Q8NBK3 374 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 TMEM54Q969K7 222 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 MRPL24Q96A35 216 aaKnown RBP10.12□□□□□ -0.79
SYNE2-207ENST00000458046 TM2D1Q9BX74 207 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 ULBP2Q9BZM5 246 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 PLA2G2EQ9NZK7 142 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 CARHSP1Q9Y2V2 147 aaKnown RBP10.12□□□□□ -0.79
SYNE2-207ENST00000458046 MEMO1Q9Y316 297 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 U3KQA8 63 aa10.12□□□□□ -0.79
SYNE2-207ENST00000458046 K7EPK0 472 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 ZIC3O60481 467 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 FCGR2CP31995 323 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 C19orf35Q6ZS72 473 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 SLC16A14Q7RTX9 510 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 FAM71E2Q8N5Q1 922 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 FNDC9Q8TBE3 224 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 SMIM8Q96KF7 97 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 NRIP2Q9BQI9 281 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 SEC11CQ9BY50 192 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 NXT1Q9UKK6 140 aaKnown RBP10.11□□□□□ -0.79
SYNE2-207ENST00000458046 FLNBO75369 2602 aaKnown RBP10.11□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF850A8MQ14 1090 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 RNASEK-C17orf49H0YIS7 233 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 H2AFB1P0C5Y9 115 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 OR5H8P0DN80 308 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 IGFBP2P18065 325 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 CAV2P51636 162 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 C10orf128Q5T292 105 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 GGNBP1Q5YKI7 109 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 ZNF562Q6V9R5 426 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 IL34Q6ZMJ4 242 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 ZIC4Q8N9L1 334 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 OR9G4Q8NGQ1 327 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 COQ2Q96H96 371 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 RCC2Q9P258 522 aaKnown RBP10.11□□□□□ -0.79
SYNE2-207ENST00000458046 CEP192Q8TEP8 1941 aa10.11□□□□□ -0.79
SYNE2-207ENST00000458046 A0A0J9YW62 118 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 TRBV7-9A0A0J9YWB2 115 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 FAM90A10PA6NDY2 464 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 C9JQL5 133 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 NBR2O15453 112 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 FXYD4P59646 89 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 RSU1Q15404 277 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 EFNB3Q15768 340 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 TSPO2Q5TGU0 170 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 FAM214BQ7L5A3 538 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 OR1L4Q8NGR5 311 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 SPTSSAQ969W0 71 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 Q96M66 194 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 PROK2Q9HC23 129 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 PARD6AQ9NPB6 346 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 AK3Q9UIJ7 227 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 ANXA10Q9UJ72 324 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 DKKL1Q9UK85 242 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 NAV2Q8IVL1 2488 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 CACNA1EQ15878 2313 aa10.1□□□□□ -0.79
SYNE2-207ENST00000458046 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms