RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 LPCAT4Q643R3 524 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 SATL1Q86VE3 508 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 SUMF2Q8NBJ7 301 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR6Q1Q8NGQ2 317 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 TNFAIP8L1Q8WVP5 186 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 ARL11Q969Q4 196 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 ST6GALNAC6Q969X2 333 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 ISOC1Q96CN7 298 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 GPER1Q99527 375 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 GABARAPL1Q9H0R8 117 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 KLK15Q9H2R5 256 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 GHITMQ9H3K2 345 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 GFOD1Q9NXC2 390 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 POMPQ9Y244 141 aa11.13□□□□□ -0.63
UPF3AP2-201ENST00000457924 J3QLW9 94 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 ATP8B1O43520 1251 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 RPSAP08865 295 aaKnown RBP11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 SLC2A2P11168 524 aaPredicted RBP11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 ZNF19P17023 458 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 PPIFP30405 207 aaKnown RBP11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 ALKBH1Q13686 389 aaKnown RBP11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 KIAA0141Q14154 515 aaPredicted RBP11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 ATP6AP1Q15904 470 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 PARP16Q8N5Y8 322 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR10K1Q8NGX5 313 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 PELI1Q96FA3 418 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 C4orf36Q96KX1 117 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 CIB1Q99828 191 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR51J1Q9H342 316 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 RIBC2Q9H4K1 309 aa11.12□□□□□ -0.63
UPF3AP2-201ENST00000457924 IGHV3-43A0A0B4J1X8 118 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 TRIM64CA6NLI5 447 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 C15orf65H3BRN8 121 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 GABRPO00591 440 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 LDLRAD4O15165 306 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 GYG2O15488 501 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 ORC5O43913 435 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR7C1O76099 320 aaPredicted RBP11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 HTR3BO95264 441 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 BPNT1O95861 308 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 IGHV3-43DP0DP04 118 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 RAB3AP20336 220 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 MYF6P23409 242 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 POLR2IP36954 125 aaKnown RBP11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 RAB9AP51151 201 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 GALEQ14376 348 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 Q3ZCU0 254 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 DNAL1Q4LDG9 190 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 FAM53AQ6NSI3 398 aaPredicted RBP11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 ADAMTSL5Q6ZMM2 481 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 SLC25A48Q6ZT89 311 aaKnown RBP11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 CCDC197Q8NCU1 140 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 UBALD1Q8TB05 177 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 CCDC107Q8WV48 283 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 IFT22Q9H7X7 185 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 DHDHQ9UQ10 334 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 ST3GAL6Q9Y274 331 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 DNAH1Q9P2D7 4330 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 LYSTQ99698 3801 aa11.11□□□□□ -0.63
UPF3AP2-201ENST00000457924 G3V318 75 aa11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 J3QRE1 110 aa11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 MMDQ15546 238 aa11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 SRSF7Q16629 238 aaKnown RBP eCLIP11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 TSEN15Q8WW01 171 aaKnown RBP11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 DLX4Q92988 240 aaPredicted RBP11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 MRPL48Q96GC5 212 aaKnown RBP11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 MYCBPQ99417 103 aaPredicted RBP11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 GABARAPL3Q9BY60 117 aa11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 EDA2RQ9HAV5 297 aa11.1□□□□□ -0.63
UPF3AP2-201ENST00000457924 TRAV41A0A0B4J266 112 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 LINC01619G3V211 115 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ATP6V0E1O15342 81 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 SLC31A2O15432 143 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 CSTBP04080 98 aaKnown RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR8U9P0C7N5 309 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 FASP25445 335 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ZNF137PP52743 207 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 SLURP1P55000 103 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 RBM11P57052 281 aaKnown RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ATAD3CQ5T2N8 411 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ASCL4Q6XD76 172 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ACBD7Q8N6N7 88 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 OR5AK2Q8NH90 309 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 NEK7Q8TDX7 302 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 TRUB1Q8WWH5 349 aaKnown RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 RBMXL1Q96E39 390 aaKnown RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ALX4Q9H161 411 aaPredicted RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 METTL9Q9H1A3 318 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 RAB9BQ9NP90 201 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 PARP11Q9NR21 331 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 IMPAD1Q9NX62 359 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ZNF581Q9P0T4 197 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 NKX1-2Q9UD57 310 aaPredicted RBP11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 ING4Q9UNL4 249 aa11.09□□□□□ -0.63
UPF3AP2-201ENST00000457924 FAM90A10PA6NDY2 464 aa11.08□□□□□ -0.64
UPF3AP2-201ENST00000457924 TMEM212A6NML5 194 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms