RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 GABRG3Q99928 467 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 SEPSECSQ9HD40 501 aaKnown RBP12.12□□□□□ -0.47
TOP3B-214ENST00000457270 CCDC163A0A0D9SF12 145 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 H3BML4 177 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 SPRY1O43609 319 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-214ENST00000457270 OTX1P32242 354 aaPredicted RBP12.12□□□□□ -0.47
TOP3B-214ENST00000457270 MYBPHQ13203 477 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 RTP5Q14D33 572 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 Q6ZSR6 202 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 CORO2AQ92828 525 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 RASL10BQ96S79 203 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 RNF24Q9Y225 148 aa12.12□□□□□ -0.47
TOP3B-214ENST00000457270 NUPR1O60356 82 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 VENTXO95231 258 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 SLC25A6P12236 298 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 TCN2P20062 427 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 TNFRSF4P43489 277 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 LRRC75BQ2VPJ9 315 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 TPTE2P1Q5T6R2 138 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 CARD17Q5XLA6 110 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 C12orf76Q8N812 135 aaPredicted RBP12.11□□□□□ -0.47
TOP3B-214ENST00000457270 PARLQ9H300 379 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 PXMP4Q9Y6I8 212 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 F5H5K5 113 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 LILRA1O75019 489 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 PDCD6O75340 191 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 NTSR1P30989 418 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 EFNA3P52797 238 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 BRICD5Q6PL45 260 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 Q6ZS49 121 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 OSR2Q8N2R0 312 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 ZNF525Q8N782 197 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 GJC3Q8NFK1 279 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 NAT6Q93015 286 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 RPUSD4Q96CM3 377 aaKnown RBP12.11□□□□□ -0.47
TOP3B-214ENST00000457270 PLK3Q9H4B4 646 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 IL36GQ9NZH8 169 aa12.11□□□□□ -0.47
TOP3B-214ENST00000457270 IGKV1-27A0A075B6S5 117 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 TRAV39A0A0B4J263 110 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 KIAA1324LA8MWY0 1029 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-214ENST00000457270 EFNA2O43921 213 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 TMEM267Q0VDI3 215 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-214ENST00000457270 RSPO1Q2MKA7 263 aaPredicted RBP12.1□□□□□ -0.47
TOP3B-214ENST00000457270 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 ZNF818PQ6ZRF7 136 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 Q6ZVH6 145 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 CMTM2Q8TAZ6 248 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 LAMA3Q16787 3333 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 A0A1W2PQF6 199 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 ACRP10323 421 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 COL9A1P20849 921 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 CNN3Q15417 329 aaKnown RBP12.1□□□□□ -0.47
TOP3B-214ENST00000457270 SPIN3Q5JUX0 258 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 ZNF738Q8NE65 137 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 MRPL30Q8TCC3 161 aaKnown RBP12.1□□□□□ -0.47
TOP3B-214ENST00000457270 LHX4Q969G2 390 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 CSTL1Q9H114 145 aa12.1□□□□□ -0.47
TOP3B-214ENST00000457270 H0Y980 276 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 NXPH3O95157 252 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 GYPAP02724 150 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 IL3RAP26951 378 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 EPHA8P29322 1005 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-214ENST00000457270 PSMB3P49720 205 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 PAFAH1B2P68402 229 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 MALLQ13021 153 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 SLC25A53Q5H9E4 307 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 Q6ZWC4 215 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 TMEM144Q7Z5S9 345 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 ZNF709Q8N972 641 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 WDYHV1Q96HA8 205 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 TRAPPC1Q9Y5R8 145 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 USP34Q70CQ2 3546 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 PIGBOS1A0A0B4J2F0 54 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
TOP3B-214ENST00000457270 CD99P14209 185 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 RPL19P84098 196 aaKnown RBP12.09□□□□□ -0.47
TOP3B-214ENST00000457270 SRSF7Q16629 238 aaKnown RBP eCLIP12.09□□□□□ -0.47
TOP3B-214ENST00000457270 C1orf185Q5T7R7 199 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 SLC22A18ASQ8N1D0 253 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 GAPTQ8N292 157 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 OXGR1Q96P68 337 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 MYO7BQ6PIF6 2116 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 TNFSF12O43508 249 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 MSR1P21757 451 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 GCH1P30793 250 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 LINC01551Q86U37 167 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 SLC39A9Q9NUM3 307 aa12.09□□□□□ -0.47
TOP3B-214ENST00000457270 IGKV1-12A0A0C4DH73 117 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 H3BP45 60 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 TOMM40O96008 361 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 IGKV1D-12P01611 117 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 ESDP10768 282 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 CAPZBP47756 277 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 UBE2G2P60604 165 aa12.08□□□□□ -0.48
TOP3B-214ENST00000457270 DLX2Q07687 328 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms