RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 ZNF319Q9P2F9 582 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 COMMD3Q9UBI1 195 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 TBX21Q9UL17 535 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 COL1A1P02452 1464 aaPredicted RBP4.53□□□□□ -1.68
VPS41-209ENST00000457055 EVPLQ92817 2033 aa4.53□□□□□ -1.68
VPS41-209ENST00000457055 MYH3P11055 1940 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 SPTBN2O15020 2390 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 A0A087WXM4 84 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 FABP5P3A8MUU1 101 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 EDF1O60869 148 aaKnown RBP4.52□□□□□ -1.69
VPS41-209ENST00000457055 APODP05090 189 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 IGKV2-30P06310 120 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 SP1P08047 785 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 PVRP15151 417 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 RCC1P18754 421 aaPredicted RBP4.52□□□□□ -1.69
VPS41-209ENST00000457055 CD58P19256 250 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 CDK2P24941 298 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 CHATP28329 748 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 DUTP33316 252 aaKnown RBP4.52□□□□□ -1.69
VPS41-209ENST00000457055 ARL2P36404 184 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 GNG11P61952 73 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 GNG5P63218 68 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 DEFA5Q01523 94 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 LY6DQ14210 128 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 SLC18B1Q6NT16 456 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 FBXL22Q6P050 247 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 RPL22L1Q6P5R6 122 aaKnown RBP4.52□□□□□ -1.69
VPS41-209ENST00000457055 ZNF66Q6ZN08 573 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 FAM183BPQ6ZVS7 135 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 RBM23Q86U06 439 aaKnown RBP4.52□□□□□ -1.69
VPS41-209ENST00000457055 PIGZQ86VD9 579 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 OR4S1Q8NGB4 309 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 OR10G7Q8NGN6 311 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 HMGCLL1Q8TB92 370 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 ZNF502Q8TBZ5 544 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 OR5P3Q8WZ94 311 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 PPCDCQ96CD2 204 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 MALSU1Q96EH3 234 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 DYNLL2Q96FJ2 89 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 GALNT14Q96FL9 552 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 OR4K3Q96R72 315 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 TRIB3Q96RU7 358 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 MGLLQ99685 303 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 SH3BGRL3Q9H299 93 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 FBXL15Q9H469 300 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 FLRT3Q9NZU0 649 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 GALPQ9UBC7 116 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 RPS6KB2Q9UBS0 482 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 SLC23A2Q9UGH3 650 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 PRNDQ9UKY0 176 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 HS3ST2Q9Y278 367 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 BTRCQ9Y297 605 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 MYO10Q9HD67 2058 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 ZMYM2Q9UBW7 1377 aa4.52□□□□□ -1.69
VPS41-209ENST00000457055 TCRBV9S1A1TA0A576 114 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ZNF732B4DXR9 585 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 H3BMQ9 156 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MLNRO43193 412 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ICOSLGO75144 302 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SEMA4FO95754 770 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MOSP00540 346 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 OXTP01178 125 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MT-ND4LP03901 98 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SERPINE1P05121 402 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 PFN1P07737 140 aaKnown RBP4.51□□□□□ -1.69
VPS41-209ENST00000457055 GM2AP17900 193 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 RPL3P39023 403 aaKnown RBP4.51□□□□□ -1.69
VPS41-209ENST00000457055 OR1D4P47884 311 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 REG1BP48304 166 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SSR4P51571 173 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 TAS2R20P59543 309 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 RPS25P62851 125 aaKnown RBP4.51□□□□□ -1.69
VPS41-209ENST00000457055 GPR50Q13585 617 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 GGTLC2Q14390 218 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 JOSD1Q15040 202 aaPredicted RBP4.51□□□□□ -1.69
VPS41-209ENST00000457055 P2RY6Q15077 328 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 RGNQ15493 299 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 PLK5Q496M5 336 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 CCSMST1Q4G0I0 132 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MORN5Q5VZ52 161 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MMD2Q8IY49 270 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 PNKDQ8N490 385 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SPICQ8N5J4 248 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 PRELID2Q8N945 189 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SCCPDHQ8NBX0 429 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 OR52E2Q8NGJ4 325 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 OR4F5Q8NH21 305 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 MFSD8Q8NHS3 518 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SLC37A2Q8TED4 501 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 RAB2BQ8WUD1 216 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 THEM6Q8WUY1 208 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 GPR146Q96CH1 333 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 WBP1Q96G27 269 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ZNF681Q96N22 645 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SIGLEC12Q96PQ1 595 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 SORT1Q99523 831 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 S100A13Q99584 98 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 AGMATQ9BSE5 352 aa4.51□□□□□ -1.69
VPS41-209ENST00000457055 ZNF471Q9BX82 626 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms