RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ABRACLQ9P1F3 81 aa8.17□□□□□ -1.1
ATG4A-206ENST00000457035 TRAPPC2LQ9UL33 140 aa8.17□□□□□ -1.1
ATG4A-206ENST00000457035 SPATA2Q9UM82 520 aa8.17□□□□□ -1.1
ATG4A-206ENST00000457035 IGHV2-26A0A0B4J1V2 119 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 MEIOCA2RUB1 952 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 C12orf77C9JDV5 145 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 TCF21O43680 179 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 SAA4P35542 130 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 LOXL3P58215 753 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 KRTAP24-1Q3LI83 254 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 ABHD12Q8N2K0 398 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 ARL11Q969Q4 196 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 RAB3CQ96E17 227 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 MEGF9Q9H1U4 602 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 ATG5Q9H1Y0 275 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 RIMS4Q9H426 269 aaPredicted RBP8.16□□□□□ -1.1
ATG4A-206ENST00000457035 AK3Q9UIJ7 227 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 SCOCQ9UIL1 159 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 ETV7Q9Y603 341 aa8.16□□□□□ -1.1
ATG4A-206ENST00000457035 F2RL2O00254 374 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 MFNGO00587 321 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 IGLV1-47P01700 117 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 ARG1P05089 322 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 GNB3P16520 340 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 NFYBP25208 207 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 TMBIM6P55061 237 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 C6orf183Q5T699 404 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 FAM53AQ6NSI3 398 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-206ENST00000457035 LHFPL4Q7Z7J7 247 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 ZNF554Q86TJ5 538 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 CLVS1Q8IUQ0 354 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-206ENST00000457035 DYNAPQ8N1N2 210 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 OR52M1Q8NGK5 317 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 OR1L1Q8NH94 360 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 UBALD1Q8TB05 177 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 SLC25A38Q96DW6 304 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 HDHD3Q9BSH5 251 aaPredicted RBP8.15□□□□□ -1.1
ATG4A-206ENST00000457035 CLEC7AQ9BXN2 247 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 ABCG5Q9H222 651 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 DCSTAMPQ9H295 470 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 ZMAT3Q9HA38 289 aaKnown RBP8.15□□□□□ -1.1
ATG4A-206ENST00000457035 TAF9BQ9HBM6 251 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 ZNF286AQ9HBT8 521 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.15□□□□□ -1.1
ATG4A-206ENST00000457035 RHBDL2Q9NX52 303 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 PSG11Q9UQ72 335 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 FAM96BQ9Y3D0 163 aa8.15□□□□□ -1.1
ATG4A-206ENST00000457035 FAM172BPA6NC97 362 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 CLDN34H7C241 214 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 HBZP02008 142 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 MELTFP08582 738 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 FBP1P09467 338 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 HIST1H1DP16402 221 aaKnown RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 PAX6P26367 422 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 IER3P46695 156 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 RORCP51449 518 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 LGALS4P56470 323 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 TNP2Q05952 138 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 BAMBIQ13145 260 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 DYNC1I2Q13409 638 aaKnown RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 SPCS2Q15005 226 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 SLC9A3R2Q15599 337 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 HMGN3Q15651 99 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 LTC4SQ16873 150 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF260Q3ZCT1 412 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 CDNFQ49AH0 187 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 SAMD5Q5TGI4 173 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 MINOS1Q5TGZ0 78 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 TRAT1Q6PIZ9 186 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 RBMS3Q6XE24 437 aaKnown RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 LDLRAD3Q86YD5 345 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 BEND2Q8NDZ0 799 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 OR4P4Q8NGL7 312 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 OR9G1Q8NH87 305 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 NDNFQ8TB73 568 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 ZNF596Q8TC21 504 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 RAB2BQ8WUD1 216 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 LEAP2Q969E1 77 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 MALSU1Q96EH3 234 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 JMJD8Q96S16 334 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 CMSS1Q9BQ75 279 aaKnown RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 BCL7BQ9BQE9 202 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 C19orf24Q9BVV8 132 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 Q9N2K0 584 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 GFOD1Q9NXC2 390 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 KCNIP1Q9NZI2 227 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 ZNRD1Q9P1U0 126 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 ELF5Q9UKW6 265 aaPredicted RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 TBL2Q9Y4P3 447 aaKnown RBP8.14□□□□□ -1.11
ATG4A-206ENST00000457035 CEPT1Q9Y6K0 416 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 MINOS1-NBL1R4GNA1 71 aa8.14□□□□□ -1.11
ATG4A-206ENST00000457035 A0A075B6Q4 140 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 A0A0A6YYH2 397 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 IGHV3-43A0A0B4J1X8 118 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 DNAJC9-AS1A6NH13 148 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 A6NJ64 397 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 SERPINE3A8MV23 424 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 LY6LH3BQJ8 138 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 BUB1B-PAK6H3BSN5 160 aa8.13□□□□□ -1.11
ATG4A-206ENST00000457035 J3QR06 171 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms