RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 FGF9P31371 208 aaPredicted RBP13.95□□□□□ -0.18
USP39-208ENST00000455732 ARHGDIBP52566 201 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 P2RY14Q15391 338 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 Q3ZCU0 254 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 TPTE2P1Q5T6R2 138 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 SYT6Q5T7P8 510 aaPredicted RBP13.95□□□□□ -0.18
USP39-208ENST00000455732 CCDC144NLQ6NUI1 221 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 FAM89BQ8N5H3 189 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 CCDC107Q8WV48 283 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 ARL11Q969Q4 196 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 LPAR5Q9H1C0 372 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 TRAPPC2LQ9UL33 140 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 PSG11Q9UQ72 335 aa13.95□□□□□ -0.18
USP39-208ENST00000455732 A0A0A6YYD4 124 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 RAB13P51153 203 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 LOXL3P58215 753 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 NKAPLQ5M9Q1 402 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 CCBE1Q6UXH8 406 aaPredicted RBP13.94□□□□□ -0.18
USP39-208ENST00000455732 OR4K15Q8NH41 348 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 MRPL30Q8TCC3 161 aaKnown RBP13.94□□□□□ -0.18
USP39-208ENST00000455732 FAM3DQ96BQ1 224 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 SULT4A1Q9BR01 284 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 NICN1Q9BSH3 213 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 URM1Q9BTM9 101 aaKnown RBP13.94□□□□□ -0.18
USP39-208ENST00000455732 NPFFR1Q9GZQ6 430 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 GFOD1Q9NXC2 390 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 STEAP1Q9UHE8 339 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 STUB1Q9UNE7 303 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 CMYA5Q8N3K9 4069 aa13.94□□□□□ -0.18
USP39-208ENST00000455732 UBE2QL1A1L167 161 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 FOXI3A8MTJ6 420 aaPredicted RBP13.93□□□□□ -0.18
USP39-208ENST00000455732 SDCBPO00560 298 aaPredicted RBP13.93□□□□□ -0.18
USP39-208ENST00000455732 LDLRAD4O15165 306 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 SPINT2O43291 252 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 JUNBP17275 347 aaPredicted RBP13.93□□□□□ -0.18
USP39-208ENST00000455732 KIR2DS4P43632 304 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 LTC4SQ16873 150 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 C22orf42Q6IC83 251 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 LINC00311Q8N616 119 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 DTX3Q8N9I9 347 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 OR51D1Q8NGF3 324 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 OR4C13Q8NGP0 309 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 LEAP2Q969E1 77 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 CYYR1Q96J86 154 aa13.93□□□□□ -0.18
USP39-208ENST00000455732 IFITM5A6NNB3 132 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 RCC1P18754 421 aaPredicted RBP13.92□□□□□ -0.18
USP39-208ENST00000455732 RAB3BP20337 219 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 BLVRBP30043 206 aaPredicted RBP13.92□□□□□ -0.18
USP39-208ENST00000455732 BRS3P32247 399 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 CLDN12P56749 244 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 OR10A3P58181 314 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 C6orf201Q7Z4U5 140 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 RPEQ96AT9 228 aa13.92□□□□□ -0.18
USP39-208ENST00000455732 TXNL4BQ9NX01 149 aaKnown RBP13.92□□□□□ -0.18
USP39-208ENST00000455732 NAPSAO96009 420 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 IGHV3-7P01780 117 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 HBZP02008 142 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 MNDAP41218 407 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 GNG10P50151 68 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 C2orf76Q3KRA6 126 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 HES5Q5TA89 166 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 C11orf88Q6PI97 169 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 C16orf82Q7Z2V1 217 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 TMEM219Q86XT9 240 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 Q8N2B8 174 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 OR10X1Q8NGY0 326 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 UBALD1Q8TB05 177 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 TOMM40LQ969M1 308 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 FAAP24Q9BTP7 215 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 TAF9BQ9HBM6 251 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 HSF4Q9ULV5 492 aa13.91□□□□□ -0.18
USP39-208ENST00000455732 TET2Q6N021 2002 aaPredicted RBP13.9□□□□□ -0.18
USP39-208ENST00000455732 TMEM272A0A1B0GTI8 110 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 SOCS1O15524 211 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 TNFAIP8O95379 198 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 RAB7AP51149 207 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 ZNF880Q6PDB4 577 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 TREML4Q6UXN2 200 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 MOB1BQ7L9L4 216 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 NR2C2APQ86WQ0 139 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 OR8H3Q8N146 312 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 ZNF439Q8NDP4 499 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 OR56B1Q8NGI3 324 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 OR1L1Q8NH94 360 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 OCSTAMPQ9BR26 566 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 RIMS4Q9H426 269 aaPredicted RBP13.9□□□□□ -0.18
USP39-208ENST00000455732 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 PLEKHJ1Q9NW61 149 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 KCNIP1Q9NZI2 227 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 RAB22AQ9UL26 194 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 SSR3Q9UNL2 185 aa13.9□□□□□ -0.18
USP39-208ENST00000455732 TRBV6-6A0A0A6YYG2 114 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 A0A1W2PPI3 338 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 FAM90A9PA6NNJ1 464 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 EFNB2P52799 333 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 TMEM50BP56557 158 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 HTD2P86397 168 aa13.89□□□□□ -0.19
USP39-208ENST00000455732 ZNF816Q0VGE8 651 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms