RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 KPRPQ5T749 579 aaPredicted RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 HENMT1Q5T8I9 393 aaKnown RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 CST9Q5W186 159 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 LRRN1Q6UXK5 716 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 C16orf47Q6ZP98 133 aaPredicted RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 TCF23Q7RTU1 214 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 DAZ4Q86SG3 579 aaKnown RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 AMN1Q8IY45 258 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 HS3ST5Q8IZT8 346 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 OR10D3Q8NH80 312 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 ERMNQ8TAM6 284 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 KLF14Q8TD94 323 aaPredicted RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 SPIN2AQ99865 258 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 SPIN2BQ9BPZ2 258 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 ZNF717Q9BY31 904 aaPredicted RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 DAZ1Q9NQZ3 744 aaKnown RBP2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 FGFR1OP2Q9NVK5 253 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 TAS2R9Q9NYW1 312 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 C3orf18Q9UK00 162 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 GUCA1BQ9UMX6 200 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 SNAPC4Q5SXM2 1469 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 KMT2EQ8IZD2 1858 aa2.43□□□□□ -2.02
HMGN3P1-201ENST00000453847 PLCH2O75038 1416 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 C9orf84Q5VXU9 1444 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 IGHV3OR16-8A0A075B7F1 116 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 LRCOL1A6NCL2 159 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 F5H5P2 479 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 MFNGO00587 321 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 REG1AP05451 166 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 NQO1P15559 274 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 CFL1P23528 166 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 RPL12P30050 165 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 MPV17P39210 176 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 FADDQ13158 208 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 ENDOGQ14249 297 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 TRMT12Q53H54 448 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 SYPL2Q5VXT5 272 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 DOLPP1Q86YN1 238 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 KRTCAP2Q8N6L1 136 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 OR1P1Q8NH06 330 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 OR4A5Q8NH83 315 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 PIGXQ8TBF5 258 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 KCTD4Q8WVF5 259 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 RAB8BQ92930 207 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 RBPMSQ93062 196 aaKnown RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 PACRGQ96M98 296 aaPredicted RBP2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 OR2V2Q96R30 315 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 TIPINQ9BVW5 301 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 XPNPEP1Q9NQW7 623 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 UBQLN4Q9NRR5 601 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 PARVAQ9NVD7 372 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 ZNF835Q9Y2P0 537 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 SNX10Q9Y5X0 201 aa2.42□□□□□ -2.02
HMGN3P1-201ENST00000453847 IGLV3-12A0A075B6K2 115 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 SSNA1O43805 119 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 STX10O60499 249 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 APOEP02649 317 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 IL4P05112 153 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 IL6P05231 212 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 LINC00614P0C842 121 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 CD34P28906 385 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 NUDT2P50583 147 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 LINC00313P59037 77 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 LINC00315P59091 139 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 MMDQ15546 238 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 ACSM3Q53FZ2 586 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 OGFRL1Q5TC84 451 aaPredicted RBP2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 LCN8Q6JVE9 175 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 EBLN2Q6P2I7 272 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 SCGB1D4Q6XE38 83 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 CYHR1Q6ZMK1 362 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 SH2D6Q7Z4S9 175 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 TMEM161BQ8NDZ6 487 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 OR1M1Q8NGA1 313 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 APOBEC3DQ96AK3 386 aaPredicted RBP2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 TESCQ96BS2 214 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 GTSF1LQ9H1H1 148 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 TXNIPQ9H3M7 391 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 LRRC19Q9H756 370 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 TMEM216Q9P0N5 145 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 NAV1Q8NEY1 1877 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 ZFYVE9O95405 1425 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 NPATQ14207 1427 aa2.41□□□□□ -2.02
HMGN3P1-201ENST00000453847 ATAD5Q96QE3 1844 aa2.4□□□□□ -2.02
HMGN3P1-201ENST00000453847 EVPLLA8MZ36 301 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 C4orf51C9J302 202 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 ISG15P05161 165 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 RPS17P08708 135 aaKnown RBP2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 CTXN2P0C2S0 81 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 OR13C7P0DN81 318 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 PTHLHP12272 177 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 PSMA1P25786 263 aaKnown RBP2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 REG1BP48304 166 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 PSMB3P49720 205 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 AP2S1P53680 142 aaPredicted RBP2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 LSM6P62312 80 aaKnown RBP2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 HPCAP84074 193 aa2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 TMEM267Q0VDI3 215 aaPredicted RBP2.4□□□□□ -2.03
HMGN3P1-201ENST00000453847 GNA13Q14344 377 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms