RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 IGHG4P01861 327 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 IGF1P05019 195 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 ZNF93P35789 620 aaPredicted RBP8.53□□□□□ -1.04
USP1-204ENST00000452143 SOX2P48431 317 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 PPP3R1P63098 170 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 DEFB136Q30KP8 78 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 ZIK1Q3SY52 487 aaPredicted RBP8.53□□□□□ -1.04
USP1-204ENST00000452143 DDI2Q5TDH0 399 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 LCNL1Q6ZST4 164 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 PYDC1Q8WXC3 89 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 RGP1Q92546 391 aaPredicted RBP8.53□□□□□ -1.04
USP1-204ENST00000452143 ARL11Q969Q4 196 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 S1PR3Q99500 378 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 S100A13Q99584 98 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 RASL11BQ9BPW5 248 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 CHCHD6Q9BRQ6 235 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 SPACA1Q9HBV2 294 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 PLSCR3Q9NRY6 295 aa8.53□□□□□ -1.04
USP1-204ENST00000452143 MRPS18AQ9NVS2 196 aaKnown RBP8.53□□□□□ -1.04
USP1-204ENST00000452143 DYNC2H1Q8NCM8 4307 aaKnown RBP8.53□□□□□ -1.04
USP1-204ENST00000452143 TRAV39A0A0B4J263 110 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 SEC14L6B5MCN3 397 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 AIPO00170 330 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 GTF2F2P13984 249 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 PSMB8P28062 276 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 BDKRB2P30411 391 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 SOX6P35712 828 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 INSL3P51460 131 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 NKAPLQ5M9Q1 402 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 ZFP1Q6P2D0 407 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 RPL22L1Q6P5R6 122 aaKnown RBP8.52□□□□□ -1.05
USP1-204ENST00000452143 ZNF497Q6ZNH5 498 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 SLC25A48Q6ZT89 311 aaKnown RBP8.52□□□□□ -1.05
USP1-204ENST00000452143 STX19Q8N4C7 294 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 CBR4Q8N4T8 237 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 OR52I1Q8NGK6 324 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 RHOXF1Q8NHV9 184 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 HSPB9Q9BQS6 159 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 CHCHD3Q9NX63 227 aaKnown RBP8.52□□□□□ -1.05
USP1-204ENST00000452143 ZNF581Q9P0T4 197 aa8.52□□□□□ -1.05
USP1-204ENST00000452143 RPL36Q9Y3U8 105 aaKnown RBP8.52□□□□□ -1.05
USP1-204ENST00000452143 C3orf84H3BNL1 204 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 SPINT2O43291 252 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 MT-ND4P03905 459 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 LIMS3P0CW19 117 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 LIMS4P0CW20 117 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 SERPINA2P20848 420 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 CHATP28329 748 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 ECI1P42126 302 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 RIPK1Q13546 671 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 GPR176Q14439 515 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 ATAD3CQ5T2N8 411 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 C6orf183Q5T699 404 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 STEAP3Q658P3 488 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 TRAT1Q6PIZ9 186 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 ZNF439Q8NDP4 499 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 MYOZ3Q8TDC0 251 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 NEK7Q8TDX7 302 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 SMIM19Q96E16 107 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 MRPS24Q96EL2 167 aaKnown RBP8.51□□□□□ -1.05
USP1-204ENST00000452143 UBE2E2Q96LR5 201 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 PRR25Q96S07 402 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 AMBNQ9NP70 447 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 RCC2Q9P258 522 aaKnown RBP8.51□□□□□ -1.05
USP1-204ENST00000452143 GNG12Q9UBI6 72 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 AASSQ9UDR5 926 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 SCOCQ9UIL1 159 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 ING4Q9UNL4 249 aa8.51□□□□□ -1.05
USP1-204ENST00000452143 ZNF256Q9Y2P7 627 aaPredicted RBP8.51□□□□□ -1.05
USP1-204ENST00000452143 HUWE1Q7Z6Z7 4374 aaKnown RBP8.51□□□□□ -1.05
USP1-204ENST00000452143 IGHV3-43A0A0B4J1X8 118 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 C12orf77C9JDV5 145 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 H3BNX3 289 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 DYNC1I1O14576 645 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 CA11O75493 328 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 OR8U8P0C7N1 319 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 IGHV3-43DP0DP04 118 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 GTF2A1P52655 376 aaPredicted RBP8.5□□□□□ -1.05
USP1-204ENST00000452143 RUNX1Q01196 453 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 ZNF260Q3ZCT1 412 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 TMPRSS11AQ6ZMR5 421 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 GAPTQ8N292 157 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 OR11H1Q8NG94 326 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 UBALD1Q8TB05 177 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 CCDC107Q8WV48 283 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 KCTD7Q96MP8 289 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 ZNF184Q99676 751 aaPredicted RBP8.5□□□□□ -1.05
USP1-204ENST00000452143 C9orf16Q9BUW7 83 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 FGF20Q9NP95 211 aaPredicted RBP8.5□□□□□ -1.05
USP1-204ENST00000452143 CKLFQ9UBR5 152 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 ZNF107Q9UII5 783 aaPredicted RBP8.5□□□□□ -1.05
USP1-204ENST00000452143 TRAPPC2LQ9UL33 140 aa8.5□□□□□ -1.05
USP1-204ENST00000452143 ZNF736B4DX44 427 aaPredicted RBP8.49□□□□□ -1.05
USP1-204ENST00000452143 MCRIP1C9JLW8 97 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 SLC31A2O15432 143 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 LANCL1O43813 399 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 IGFBP3P17936 291 aaPredicted RBP8.49□□□□□ -1.05
USP1-204ENST00000452143 FSTP19883 344 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 DCKP27707 260 aa8.49□□□□□ -1.05
USP1-204ENST00000452143 VHLP40337 213 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms