RNA–Protein interactions for RNA: ENST00000450000.5

CPSF7-208, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-208ENST00000450000 GNAO1P09471 354 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 IGLL1P15814 213 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 MGMTP16455 207 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 TMEM30BQ3MIR4 351 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 TCTEX1D4Q5JR98 221 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 ZNF329Q86UD4 541 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 C5orf56Q8N8D9 126 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 ZNF485Q8NCK3 441 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 OR2T10Q8NGZ9 312 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 OR4K15Q8NH41 348 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 DERL3Q96Q80 235 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 CST11Q9H112 138 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 PLCXD1Q9NUJ7 323 aa17.43■□□□□ 0.38
CPSF7-208ENST00000450000 IGHV3-72A0A0B4J1Y9 119 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 NUDT19A8MXV4 375 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 CA11O75493 328 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 CD1AP06126 327 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 LOXL3P58215 753 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 GPR50Q13585 617 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 OGFRL1Q5TC84 451 aaPredicted RBP17.42■□□□□ 0.38
CPSF7-208ENST00000450000 C10orf99Q6UWK7 81 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 LINC00311Q8N616 119 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 C8orf31Q8N9H6 132 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 WFDC9Q8NEX5 89 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 UQCC2Q9BRT2 126 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 MND1Q9BWT6 205 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 GHRLQ9UBU3 117 aa17.42■□□□□ 0.38
CPSF7-208ENST00000450000 FAM90A10PA6NDY2 464 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 FAM90A7PA6NKC0 464 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 FAM90A23PA8MXZ1 464 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 TXNL1O43396 289 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 DUS4LO95620 317 aaKnown RBP17.41■□□□□ 0.38
CPSF7-208ENST00000450000 FUT3P21217 361 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 Q3ZCU0 254 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 TGIF2LXQ8IUE1 241 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 MS4A15Q8N5U1 240 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 NANOGP1Q8N7R0 232 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 OR10V1Q8NGI7 309 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 RCC1LQ96I51 464 aaKnown RBP17.41■□□□□ 0.38
CPSF7-208ENST00000450000 GON7Q9BXV9 100 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 SCN3BQ9NY72 215 aa17.41■□□□□ 0.38
CPSF7-208ENST00000450000 RCC2Q9P258 522 aaKnown RBP17.41■□□□□ 0.38
CPSF7-208ENST00000450000 UBE2QL1A1L167 161 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 C12orf77C9JDV5 145 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 GLAP06280 429 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 GABPB1Q06547 395 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-208ENST00000450000 NKAPLQ5M9Q1 402 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 FOXB2Q5VYV0 432 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 GLT8D1Q68CQ7 371 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 COMMD1Q8N668 190 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 TFAP2CQ92754 450 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 DPF1Q92782 380 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 FAM46BQ96A09 425 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 EAF1Q96JC9 268 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-208ENST00000450000 NOL4LQ96MY1 436 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-208ENST00000450000 NEDD4LQ96PU5 975 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 RASL11BQ9BPW5 248 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 GPR61Q9BZJ8 451 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 LINC00527Q9UJ94 153 aa17.4■□□□□ 0.38
CPSF7-208ENST00000450000 PLXNB1O43157 2135 aa17.39■□□□□ 0.38
CPSF7-208ENST00000450000 PTGES3LE9PB15 166 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 CASQ2O14958 399 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-208ENST00000450000 MOSP00540 346 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 HBZP02008 142 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 UBBP0CG47 229 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 ACSM3Q53FZ2 586 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 IZUMO1Q8IYV9 350 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 RTN4IP1Q8WWV3 396 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-208ENST00000450000 OR2S2Q9NQN1 319 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 ZFP57Q9NU63 452 aa17.39■□□□□ 0.37
CPSF7-208ENST00000450000 AURKAIP1Q9NWT8 199 aaPredicted RBP17.39■□□□□ 0.37
CPSF7-208ENST00000450000 MPIG6BO95866 241 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 CD1BP29016 333 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 RBM48Q5RL73 367 aaKnown RBP17.38■□□□□ 0.37
CPSF7-208ENST00000450000 Q6ZPA2 131 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 TMEM104Q8NE00 496 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 OR1L1Q8NH94 360 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 TMED9Q9BVK6 235 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 TAF9BQ9HBM6 251 aa17.38■□□□□ 0.37
CPSF7-208ENST00000450000 LIN7CQ9NUP9 197 aaKnown RBP17.38■□□□□ 0.37
CPSF7-208ENST00000450000 H0YHG0 523 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 AP4M1O00189 453 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 RRP9O43818 475 aaKnown RBP17.37■□□□□ 0.37
CPSF7-208ENST00000450000 PDCD6O75340 191 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 IGHG2P01859 326 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 CDK1P06493 297 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 VHLP40337 213 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 RPL23AP62750 156 aaKnown RBP17.37■□□□□ 0.37
CPSF7-208ENST00000450000 EBI3Q14213 229 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 MED22Q15528 200 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 SLC25A48Q6ZT89 311 aaKnown RBP17.37■□□□□ 0.37
CPSF7-208ENST00000450000 STPG2Q8N412 459 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 OR8H1Q8NGG4 311 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 FBLIM1Q8WUP2 373 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 Q96M66 194 aa17.37■□□□□ 0.37
CPSF7-208ENST00000450000 RGS11O94810 467 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 RCC1P18754 421 aaPredicted RBP17.36■□□□□ 0.37
CPSF7-208ENST00000450000 SLC6A1P30531 599 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 LAIR2Q6ISS4 152 aa17.36■□□□□ 0.37
CPSF7-208ENST00000450000 TEX38Q6PEX7 206 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms