RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 HES1Q14469 280 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 HNF4GQ14541 408 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 PIGYQ3MUY2 71 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 DEFB121Q5J5C9 76 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 NHLRC3Q5JS37 347 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 ZNF329Q86UD4 541 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 THNSL2Q86YJ6 484 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 DRAM1Q8N682 238 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 PLPPR1Q8TBJ4 325 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 MUL1Q969V5 352 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 RCC1LQ96I51 464 aaKnown RBP13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 UQCC2Q9BRT2 126 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 NCOR1P1Q9H4R4 102 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 ST3GAL6Q9Y274 331 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 LRRC42Q9Y546 428 aa13.16□□□□□ -0.3
RAB11FIP3-204ENST00000449879 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 K7EIL1 84 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 ARL6IP5O75915 188 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 IL1AP01583 271 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 SRMP19623 302 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 GNG10P50151 68 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 GP2P55259 537 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 RBM11P57052 281 aaKnown RBP13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 MADCAM1Q13477 382 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 SLC22A6Q4U2R8 563 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 RSBN1Q5VWQ0 802 aaPredicted RBP13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 AWAT2Q6E213 333 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 GLIPR1L1Q6UWM5 242 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 LINC00596Q86U02 117 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 LYPD6Q86Y78 171 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 SPARTQ8N0X7 666 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
RAB11FIP3-204ENST00000449879 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 NPIPB11E5RHQ5 1161 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GTF2F2P13984 249 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 TMEM11P17152 192 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 UBE2UQ5VVX9 321 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GLT8D1Q68CQ7 371 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 ZNF773Q6PK81 442 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 TMEM91Q6ZNR0 172 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 LRRTM1Q86UE6 522 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 NOL4LQ96MY1 436 aaPredicted RBP13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 LINC00574Q9H8X3 128 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 NDUFB11Q9NX14 153 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 ZNF581Q9P0T4 197 aa13.14□□□□□ -0.31
RAB11FIP3-204ENST00000449879 A0A1W2PPI3 338 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 OR7C1O76099 320 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 DUS4LO95620 317 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 HOXD3P31249 432 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 SSTR5P35346 364 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 KRTAP10-11P60412 298 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 FABP5Q01469 135 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 SSX1Q16384 188 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 KCTD21Q4G0X4 260 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 SUMF2Q8NBJ7 301 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 OR10X1Q8NGY0 326 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 MRPS24Q96EL2 167 aaKnown RBP13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 DPCDQ9BVM2 203 aaPredicted RBP13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 IFT22Q9H7X7 185 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GHRLQ9UBU3 117 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 LINC00527Q9UJ94 153 aa13.13□□□□□ -0.31
RAB11FIP3-204ENST00000449879 A0A1W2PP11 408 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 WI2-2373I1.2A0A1W2PRP0 233 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 SERPINE3A8MV23 424 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 CCRL2O00421 344 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GEMIN2O14893 280 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 IGKV1D-33P01593 117 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 IGKV1-33P01594 117 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 UBBP0CG47 229 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 PSMB9P28065 219 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 KCNJ3P48549 501 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 RAB7AP51149 207 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 MPV17LQ2QL34 196 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 MRPL41Q8IXM3 137 aaKnown RBP13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 OR8H3Q8N146 312 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 C5orf56Q8N8D9 126 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 LINC00482Q8N8I6 264 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 OR10A7Q8NGE5 316 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 OR51D1Q8NGF3 324 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 CHPT1Q8WUD6 406 aa13.12□□□□□ -0.31
RAB11FIP3-204ENST00000449879 CRTAPO75718 401 aaPredicted RBP13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GZMHP20718 246 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 CALRP27797 417 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 RPL23AP62750 156 aaKnown RBP13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 PAX5Q02548 391 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 C1orf100Q5SVJ3 147 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 SLC16A12Q6ZSM3 486 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 C18orf65Q6ZTR6 163 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 MOB3BQ86TA1 216 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 CST11Q9H112 138 aa13.11□□□□□ -0.31
RAB11FIP3-204ENST00000449879 IGHV3-72A0A0B4J1Y9 119 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 NUDT19A8MXV4 375 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 HSD17B6O14756 317 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 FGF16O43320 207 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 GAPDHP04406 335 aaKnown RBP13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 MGMTP16455 207 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 HTR2CP28335 458 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 REG1BP48304 166 aa13.1□□□□□ -0.31
RAB11FIP3-204ENST00000449879 THBS3P49746 956 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms