RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 F2RL1P55085 397 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 TNFAIP6P98066 277 aaPredicted RBP8.3□□□□□ -1.08
CCDC171-203ENST00000449575 PRDX4Q13162 271 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 Q5PR19 223 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 ASPHD2Q6ICH7 369 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 Q6ZSR3 168 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 RNF144BQ7Z419 303 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 REC114Q7Z4M0 266 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 SSX3Q99909 188 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 CHST6Q9GZX3 395 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM231Q9H6L2 316 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 GPR173Q9NS66 373 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 LPAR3Q9UBY5 353 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 A0A1B0GV90 55 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 ISG15P05161 165 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 ADH4P08319 380 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 DAOP14920 347 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 SOX2P48431 317 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 CLDN12P56749 244 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 RBM39Q14498 530 aaKnown RBP8.3□□□□□ -1.08
CCDC171-203ENST00000449575 OR8G1Q15617 311 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 LRRC37A5PQ49AS3 106 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 KRBOX4Q5JUW0 171 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 DOK3Q7L591 496 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 C1QL4Q86Z23 238 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM229BQ8NBD8 167 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 NPRL2Q8WTW4 380 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 FGGYQ96C11 551 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 SAP30LQ9HAJ7 183 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 RPS10P5Q9NQ39 176 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 ZDHHC8Q9ULC8 765 aa8.3□□□□□ -1.08
CCDC171-203ENST00000449575 CSPG4Q6UVK1 2322 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ANKRD30BLA7E2S9 258 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 PPIHO43447 177 aaKnown RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 RAB3DO95716 219 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ATP1B3P54709 279 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ATXN7L3Q14CW9 347 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 UBE2V2Q15819 145 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF826PQ6ZT77 177 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 OR10R2Q8NGX6 335 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 FOXRED1Q96CU9 486 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CPNE2Q96FN4 548 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 C14orf144Q96I85 54 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 MEGF10Q96KG7 1140 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM68Q96MH6 324 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 MICU1Q9BPX6 476 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 DECR2Q9NUI1 292 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF107Q9UII5 783 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF391Q9UJN7 358 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 IGHV4-30-2A0A087WSY4 118 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF816-ZNF321PA0A0X1KG74 233 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 A0A1W2PPE3 182 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM212A6NML5 194 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CD55P08174 381 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CYCSP99999 105 aaKnown RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 DHRS2Q13268 280 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 FAM201AQ5SY85 155 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 TMEM42Q69YG0 159 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 TMED4Q7Z7H5 227 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 LRRTM1Q86UE6 522 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CSNK2A3Q8NEV1 391 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 SMIM8Q96KF7 97 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 NKX3-1Q99801 234 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 FOXC2Q99958 501 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 SULT4A1Q9BR01 284 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CXXC4Q9H2H0 198 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 GCM1Q9NP62 436 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 CGGBP1Q9UFW8 167 aaPredicted RBP8.29□□□□□ -1.08
CCDC171-203ENST00000449575 STEAP1Q9UHE8 339 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 HHLA2Q9UM44 414 aa8.29□□□□□ -1.08
CCDC171-203ENST00000449575 IGKV1-9A0A0C4DH69 117 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 WNT9BO14905 357 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 FBXO24O75426 580 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 ZNF205O95201 554 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CST4P01036 141 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CD3DP04234 171 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CD5P06127 495 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 GRPP07492 148 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 FAM157CP0CG43 387 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 DVL1P1P54792 670 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 TESK1Q15569 626 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 Q499Y3 187 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 LHFPL2Q6ZUX7 228 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 MOGAT3Q86VF5 341 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 LRRC75A-AS1Q8N1F1 130 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 MAPK1IP1LQ8NDC0 245 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 OR13C3Q8NGS6 347 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 NEU4Q8WWR8 484 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 OR5P3Q8WZ94 311 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CCL17Q92583 94 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 Q96MF0 132 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 PHB2Q99623 299 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 CHMP1AQ9HD42 196 aaPredicted RBP8.28□□□□□ -1.08
CCDC171-203ENST00000449575 IL19Q9UHD0 177 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 ABCA1O95477 2261 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 MALRD1Q5VYJ5 2156 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 F8P00451 2351 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 WNK2Q9Y3S1 2297 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 IGHV1-69-2A0A0G2JMI3 117 aa8.28□□□□□ -1.08
CCDC171-203ENST00000449575 NRASP01111 189 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms