RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 AMMECR1Q9Y4X0 333 aaPredicted RBP11.76□□□□□ -0.53
USP39-206ENST00000448971 SHISA3A0PJX4 238 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 SMIM30A4D0T7 59 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 VGLL3A8MV65 326 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 LEUTXA8MZ59 168 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 NPIPB11E5RHQ5 1161 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 SDCBPO00560 298 aaPredicted RBP11.75□□□□□ -0.53
USP39-206ENST00000448971 SPINT2O43291 252 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 NDUFA7O95182 113 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 IGLV1-47P01700 117 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 MT-ND4P03905 459 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 GLAP06280 429 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CGB3P0DN86 165 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CGB7P0DN87 165 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 GZMHP20718 246 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CHATP28329 748 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 BLVRBP30043 206 aaPredicted RBP11.75□□□□□ -0.53
USP39-206ENST00000448971 KRTAP10-3P60369 221 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 TRAT1Q6PIZ9 186 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 C6orf201Q7Z4U5 140 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 TOMM40LQ969M1 308 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CREB3L1Q96BA8 519 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 FAM3DQ96BQ1 224 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CYYR1Q96J86 154 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 SULT4A1Q9BR01 284 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 MMP28Q9H239 520 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 CHMP1AQ9HD42 196 aaPredicted RBP11.75□□□□□ -0.53
USP39-206ENST00000448971 RAB18Q9NP72 206 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
USP39-206ENST00000448971 TCF19Q9Y242 345 aa11.75□□□□□ -0.53
USP39-206ENST00000448971 IGHV3-43A0A0B4J1X8 118 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 C12orf77C9JDV5 145 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 C15orf65H3BRN8 121 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 ORC5O43913 435 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 IGHV3-43DP0DP04 118 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 CD37P11049 281 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 JUNBP17275 347 aaPredicted RBP11.74□□□□□ -0.53
USP39-206ENST00000448971 QRFPP83859 136 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 UTF1Q5T230 341 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 TPTE2P1Q5T6R2 138 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 OLFML2AQ68BL7 652 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 OR10X1Q8NGY0 326 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 RPEQ96AT9 228 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 CHCHD6Q9BRQ6 235 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 OR51E2Q9H255 320 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 LINC00574Q9H8X3 128 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 PLEKHJ1Q9NW61 149 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 KCNIP1Q9NZI2 227 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 GNG12Q9UBI6 72 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 PITPNC1Q9UKF7 332 aa11.74□□□□□ -0.53
USP39-206ENST00000448971 A0A087WXM4 84 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 A0A0A6YYD4 124 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 LOC100506127A0A0U1RQW1 187 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 A0A1W2PPE3 182 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 IFITM5A6NNB3 132 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 BUB1B-PAK6H3BSN5 160 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 J3QR06 171 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 CD36P16671 472 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 FGF9P31371 208 aaPredicted RBP11.73□□□□□ -0.53
USP39-206ENST00000448971 RAB13P51153 203 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 CCDC144NLQ6NUI1 221 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 Q6ZSV7 163 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 TMEM219Q86XT9 240 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 GAPTQ8N292 157 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 TSPAN14Q8NG11 270 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 OR4C13Q8NGP0 309 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 SETD6Q8TBK2 473 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 MRPL30Q8TCC3 161 aaKnown RBP11.73□□□□□ -0.53
USP39-206ENST00000448971 MMP27Q9H306 513 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 LIN7BQ9HAP6 207 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 PSG11Q9UQ72 335 aa11.73□□□□□ -0.53
USP39-206ENST00000448971 TMEM272A0A1B0GTI8 110 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 CLPSL1A2RUU4 121 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 SOCS1O15524 211 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 CHST1O43916 411 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 HBZP02008 142 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 RCC1P18754 421 aaPredicted RBP11.72□□□□□ -0.53
USP39-206ENST00000448971 GADD45AP24522 165 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 BRS3P32247 399 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 MNDAP41218 407 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 VEGFCP49767 419 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 DYNLT3P51808 116 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 PRR20EP86478 221 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 PRR20CP86479 221 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 PRR20DP86480 221 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 PRR20BP86481 221 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 PRR20AP86496 221 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 MADCAM1Q13477 382 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 C2orf76Q3KRA6 126 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 TMEM30BQ3MIR4 351 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 OR56B1Q8NGI3 324 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 OR10V1Q8NGI7 309 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 OR52M1Q8NGK5 317 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 OR1L1Q8NH94 360 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 KCTD7Q96MP8 289 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 FAAP24Q9BTP7 215 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 NPFFR1Q9GZQ6 430 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 TAF9BQ9HBM6 251 aa11.72□□□□□ -0.53
USP39-206ENST00000448971 GFOD1Q9NXC2 390 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms