RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 RAB18Q9NP72 206 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 PTTG2Q9NZH5 202 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 EXTL2Q9UBQ6 330 aa11.17□□□□□ -0.62
PDLIM2-213ENST00000448520 TRBV23-1A0A0A0MS06 115 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A10PA6NDY2 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A18PA6NE21 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A16PA6NEW6 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A20PA6NIJ5 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A8PA6NJQ4 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A7PA6NKC0 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A22PA8MWA6 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A12PA8MX19 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A5PA8MXJ8 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A23PA8MXZ1 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 K7N7A8 449 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 MFNGO00587 321 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 PLXNB1O43157 2135 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 TSPAN15O95858 294 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 TK1P04183 234 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A15PP0C7V4 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A13PP0C7W8 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A14PP0C7W9 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FAM90A24PP0C7X0 464 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 FUT3P21217 361 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 RANBP1P43487 201 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 KLRD1Q13241 179 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 HERPUD1Q15011 391 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 GRK1Q15835 563 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 AANATQ16613 207 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 OR6Q1Q8NGQ2 317 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 RAB3CQ96E17 227 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 SNX22Q96L94 193 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 SSX3Q99909 188 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 IFT22Q9H7X7 185 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 SEBOXQ9HB31 216 aaPredicted RBP11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 AK3Q9UIJ7 227 aa11.16□□□□□ -0.62
PDLIM2-213ENST00000448520 DSCAML1Q8TD84 2053 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 A0A1W2PPH5 198 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 TMEM235A6NFC5 223 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 HIST1H1DP16402 221 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 GLIPR1P48060 266 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 DLX1P56177 255 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 TAS2R20P59543 309 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 PRB3Q04118 309 aaPredicted RBP11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 AESQ08117 197 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 RNASE12Q5GAN4 147 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 Q6ZPA2 131 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 C5orf24Q7Z6I8 188 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 OR8H2Q8N162 312 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 S100A16Q96FQ6 103 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 DIRAS2Q96HU8 199 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 HEXA-AS1Q9H8Q6 139 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 PLEKHJ1Q9NW61 149 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 MRPS7Q9Y2R9 242 aaKnown RBP11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 A3GALT2U3KPV4 340 aa11.15□□□□□ -0.62
PDLIM2-213ENST00000448520 hCG_1809904A0A1W2PP81 198 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 A0A1W2PPE2 198 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 A0A1W2PR64 198 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 A0A1W2PRV1 198 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 MCRIP1C9JLW8 97 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 H3BUX3 64 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 FCER2P06734 321 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 EDDM3BP56851 147 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 ZNF260Q3ZCT1 412 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 CDNFQ49AH0 187 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 TMEM69Q5SWH9 247 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 RSBN1Q5VWQ0 802 aaPredicted RBP11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 TCF23Q7RTU1 214 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 SNX29P2Q8IUI4 249 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 PNKDQ8N490 385 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 CCDC107Q8WV48 283 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 NUDCD2Q8WVJ2 157 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 PHF21AQ96BD5 680 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 CMTM3Q96MX0 182 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 RANBP3Q9H6Z4 567 aaPredicted RBP11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 DIABLOQ9NR28 239 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 C19orf12Q9NSK7 152 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 ETAA1Q9NY74 926 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 KIF25Q9UIL4 384 aa11.14□□□□□ -0.63
PDLIM2-213ENST00000448520 MEIS3P1A6NDR6 274 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 MGST3O14880 152 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 XRCC3O43542 346 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 SSX5O60225 188 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 HLA-DQB1P01920 261 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OPN1MWP04001 364 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OPN1MW2P0DN77 364 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OPN1MW3P0DN78 364 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 S100A5P33763 92 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 LRRC75BQ2VPJ9 315 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 FBLN7Q53RD9 439 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 KRBOX4Q5JUW0 171 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 HCP5Q6MZN7 132 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 LIAT1Q6ZQX7 453 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 GDPD3Q7L5L3 318 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OR4C13Q8NGP0 309 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OR4K15Q8NH41 348 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 OR2T6Q8NHC8 308 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 AUNIPQ9H7T9 357 aa11.13□□□□□ -0.63
PDLIM2-213ENST00000448520 SPACA1Q9HBV2 294 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms