RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 ABCG5Q9H222 651 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 MCUBQ9NWR8 336 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 CLEC5AQ9NY25 188 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 ZNF222Q9UK12 451 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 MOKQ9UQ07 419 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 NUBP2Q9Y5Y2 271 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 V9GY05 133 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 COL4A2P08572 1712 aa3.13□□□□□ -1.91
VPS29-202ENST00000447578 TRPM6Q9BX84 2022 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TRAV36DV7A0A075B6V5 113 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGKV1D-8A0A087WSZ0 117 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGHV1OR21-1A0A087WYE8 117 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGKV3D-11A0A0A0MRZ8 115 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TMED7-TICAM2A0A0A6YYA0 188 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TRAV25A0A0B4J276 109 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 A0A1B0GX78 115 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IFITM5A6NNB3 132 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C17orf51A8MQB3 221 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 FAM25EA8MYX2 175 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 CENPBD1B2RD01 187 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 H3BSH0 61 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 AIPO00170 330 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 XKRYO14609 159 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 CDX4O14627 284 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 PHYHO14832 338 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 RAB29O14966 203 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 PHF1O43189 567 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 GSTZ1O43708 216 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 CDC40O60508 579 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS29-202ENST00000447578 EIF4E2O60573 245 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGF2P01344 180 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C1QBP02746 253 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 BGLAPP02818 100 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 MT-ND4P03905 459 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 MAS1P04201 325 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGKV3-11P04433 115 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TCRBP04435 133 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 IGLL1P15814 213 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 GATA1P15976 413 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 ZNF43P17038 809 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 BCKDHBP21953 392 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 STOMP27105 288 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 LCN1P31025 176 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 EVI2BP34910 448 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 BTCP35070 178 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 RPS27P42677 84 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 CCR6P51684 374 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 POLR2HP52434 150 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 CLDN12P56749 244 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 SNRPD2P62316 118 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 ZFP36L1Q07352 338 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 EBPQ15125 230 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 NSDHLQ15738 373 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TOMM34Q15785 309 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 SLC36A2Q495M3 483 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 PAN3Q58A45 887 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 Q5BKY6 102 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 OR2B11Q5JQS5 317 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 ZNF684Q5T5D7 378 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C6orf183Q5T699 404 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C9orf135Q5VTT2 229 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 PLCXD3Q63HM9 321 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 Q6ZN92 141 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 SHISA6Q6ZSJ9 500 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 CDC20BQ86Y33 519 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 PLCZ1Q86YW0 608 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 OR6V1Q8N148 313 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 OR5AK2Q8NH90 309 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 LILRB4Q8NHJ6 448 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 SYNPRQ8TBG9 265 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 ZFAND1Q8TCF1 268 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 RPS4Y2Q8TD47 263 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 DEDD2Q8WXF8 326 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 RGP1Q92546 391 aaPredicted RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 YIPF5Q969M3 257 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 SGK3Q96BR1 496 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 FGGYQ96C11 551 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 FOXN4Q96NZ1 517 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 OR2M2Q96R28 347 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 TMEM59Q9BXS4 323 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 CHRNA10Q9GZZ6 450 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 MED28Q9H204 178 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 SYT4Q9H2B2 425 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 OR51J1Q9H342 316 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 C12orf10Q9HB07 376 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 BEX1Q9HBH7 125 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TAS2R5Q9NYW4 299 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 STMN3Q9NZ72 180 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 B4GALT7Q9UBV7 327 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 MRM2Q9UI43 246 aaKnown RBP3.12□□□□□ -1.91
VPS29-202ENST00000447578 ING4Q9UNL4 249 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 BPTFQ12830 3046 aa3.12□□□□□ -1.91
VPS29-202ENST00000447578 TRAV8-7A0A075B6U6 113 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 NSG1A0A0A6YYJ2 146 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 A0A1W2PQD3 144 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 C7orf66A4D0T2 115 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 TMEM212A6NML5 194 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 OR4C45A6NMZ5 311 aa3.11□□□□□ -1.91
VPS29-202ENST00000447578 ZNF593O00488 134 aaPredicted RBP3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms