RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 IGHV3-43A0A0B4J1X8 118 aa13□□□□□ -0.33
USP39-205ENST00000442708 F2RL2O00254 374 aa13□□□□□ -0.33
USP39-205ENST00000442708 TCF21O43680 179 aa13□□□□□ -0.33
USP39-205ENST00000442708 TMEM127O75204 238 aa13□□□□□ -0.33
USP39-205ENST00000442708 HBZP02008 142 aa13□□□□□ -0.33
USP39-205ENST00000442708 IGHV3-43DP0DP04 118 aa13□□□□□ -0.33
USP39-205ENST00000442708 DYNC1I2Q13409 638 aaKnown RBP13□□□□□ -0.33
USP39-205ENST00000442708 CDNFQ49AH0 187 aa13□□□□□ -0.33
USP39-205ENST00000442708 C6orf183Q5T699 404 aa13□□□□□ -0.33
USP39-205ENST00000442708 OR52W1Q6IF63 320 aa13□□□□□ -0.33
USP39-205ENST00000442708 Q6YL49 198 aa13□□□□□ -0.33
USP39-205ENST00000442708 PRR18Q8N4B5 295 aa13□□□□□ -0.33
USP39-205ENST00000442708 RAB2BQ8WUD1 216 aa13□□□□□ -0.33
USP39-205ENST00000442708 ISOC1Q96CN7 298 aa13□□□□□ -0.33
USP39-205ENST00000442708 CHMP1AQ9HD42 196 aaPredicted RBP13□□□□□ -0.33
USP39-205ENST00000442708 DNAJC9-AS1A6NH13 148 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 MELTFP08582 738 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 RORCP51449 518 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 HMGN3Q15651 99 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 FAM189A2Q15884 450 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 DTX3Q8N9I9 347 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 OR10A7Q8NGE5 316 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 OR4P4Q8NGL7 312 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 CMSS1Q9BQ75 279 aaKnown RBP12.99□□□□□ -0.33
USP39-205ENST00000442708 RBM38Q9H0Z9 239 aaKnown RBP12.99□□□□□ -0.33
USP39-205ENST00000442708 ABCG5Q9H222 651 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 Q9N2K0 584 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 C12orf4Q9NQ89 552 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 PSG11Q9UQ72 335 aa12.99□□□□□ -0.33
USP39-205ENST00000442708 A0A0A6YYJ9 748 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 A0A1W2PPE3 182 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 H3BMQ9 156 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 SDCBPO00560 298 aaPredicted RBP12.98□□□□□ -0.33
USP39-205ENST00000442708 GNG10P50151 68 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 GNMTQ14749 295 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 SLC9A3R2Q15599 337 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 TRAT1Q6PIZ9 186 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 IZUMO1Q8IYV9 350 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 SAMD12Q8N8I0 201 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 SETD6Q8TBK2 473 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 KCTD12Q96CX2 325 aaKnown RBP12.98□□□□□ -0.33
USP39-205ENST00000442708 BCL7BQ9BQE9 202 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 RIMS4Q9H426 269 aaPredicted RBP12.98□□□□□ -0.33
USP39-205ENST00000442708 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.98□□□□□ -0.33
USP39-205ENST00000442708 GFOD1Q9NXC2 390 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 COMMD3Q9UBI1 195 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 FAM96BQ9Y3D0 163 aa12.98□□□□□ -0.33
USP39-205ENST00000442708 TMEM235A6NFC5 223 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 J3QR06 171 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 SPINT2O43291 252 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 HOXA3O43365 443 aaPredicted RBP12.97□□□□□ -0.33
USP39-205ENST00000442708 IGHV4-59P01825 116 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 EIF4EP06730 217 aaKnown RBP12.97□□□□□ -0.33
USP39-205ENST00000442708 FCGR3AP08637 254 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 FBP1P09467 338 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 CD3GP09693 182 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 LGALS4P56470 323 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 BAMBIQ13145 260 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 UBE2NLQ5JXB2 153 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 ZNF554Q86TJ5 538 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 LDLRAD3Q86YD5 345 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 OR52L2PQ8NGH6 319 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 OR10V1Q8NGI7 309 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 OR52M1Q8NGK5 317 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 DYNC2LI1Q8TCX1 351 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 MAFIPQ8WZ33 124 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 KCNIP1Q9NZI2 227 aa12.97□□□□□ -0.33
USP39-205ENST00000442708 ZNF230Q9UIE0 474 aaPredicted RBP12.97□□□□□ -0.33
USP39-205ENST00000442708 TBL2Q9Y4P3 447 aaKnown RBP12.97□□□□□ -0.33
USP39-205ENST00000442708 TRAV18A0A075B6X5 111 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 SERPINE3A8MV23 424 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 LY6LH3BQJ8 138 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 SLC31A2O15432 143 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 SSX5O60225 188 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 SCTP09683 121 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 PTHLHP12272 177 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 ZNF182P17025 639 aaPredicted RBP12.96□□□□□ -0.33
USP39-205ENST00000442708 IER3P46695 156 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 UBA52P62987 128 aaKnown RBP12.96□□□□□ -0.33
USP39-205ENST00000442708 HACD4Q5VWC8 232 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 RBMS3Q6XE24 437 aaKnown RBP12.96□□□□□ -0.33
USP39-205ENST00000442708 MOB1BQ7L9L4 216 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 ZNF439Q8NDP4 499 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 BEND2Q8NDZ0 799 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 OR9G1Q8NH87 305 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 NUDCD2Q8WVJ2 157 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 MEGF9Q9H1U4 602 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 TNFRSF19Q9NS68 423 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 HILPDAQ9Y5L2 63 aa12.96□□□□□ -0.33
USP39-205ENST00000442708 IGKV1D-8A0A087WSZ0 117 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 IGKV1-6A0A0C4DH72 117 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 BUB1B-PAK6H3BSN5 160 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 TOR1AO14656 332 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 HPGDSO60760 199 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 SCGNO76038 276 aa12.95□□□□□ -0.34
USP39-205ENST00000442708 GSTP1P09211 210 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms