RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 AURKAIP1Q9NWT8 199 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 TAAR3PQ9P1P4 343 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 A0A087WZY1 265 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 CDX4O14627 284 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 SRP19P09132 144 aaKnown RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 FOLR2P14207 255 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF266Q14584 549 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 SPANXN5Q5MJ07 72 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 CPT1CQ8TCG5 803 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 GPR146Q96CH1 333 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 FOXJ2Q9P0K8 574 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 TCFL5Q9UL49 500 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 SVEP1Q4LDE5 3571 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 TACC2O95359 2948 aa11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 COL27A1Q8IZC6 1860 aaPredicted RBP11.2□□□□□ -0.62
SLC48A1-201ENST00000442218 LOC102723996A0A087X1L8 192 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 TRAPPC2LH3BP13 241 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 RPL36A-HNRNPH2H7BZ11 118 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 TUSC2O75896 110 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 WISP2O76076 250 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 SCAF4O95104 1147 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 SERPINE2P07093 398 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 TESK1Q15569 626 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 HEPN1Q6WQI6 88 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 FOXL2NBQ6ZUU3 175 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 CT55Q8WUE5 264 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 MUCL1Q96DR8 90 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 THOC3Q96J01 351 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 PLK3Q9H4B4 646 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 Q9N2K0 584 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 LYRM2Q9NU23 88 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 GALR2O43603 387 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 PGLYRP1O75594 196 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 CD55P08174 381 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 SMIM6P0DI80 62 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 CD59P13987 128 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 MAGEA5P43359 124 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 TMEM42Q69YG0 159 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 ZDHHC23Q8IYP9 409 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 RPRMQ9NS64 109 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 LRFN1Q9P244 771 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 ARFGEF3Q5TH69 2177 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 IFNA17P01571 189 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 MMP7P09237 267 aaPredicted RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 PAX9P55771 341 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 RAB1AP62820 205 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 ELOBQ15370 118 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 HMGN3Q15651 99 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 EXT1Q16394 746 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF383Q8NA42 475 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 PLPPR1Q8TBJ4 325 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 INTS12Q96CB8 462 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 PFDN5Q99471 154 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 TOLLIPQ9H0E2 274 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 METTL1Q9UBP6 276 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 OR14J1Q9UGF5 321 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
SLC48A1-201ENST00000442218 KIAA1549Q9HCM3 1950 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 CXorf65A6NEN9 183 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 PPIHO43447 177 aaKnown RBP11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 IGHV3-13P01766 116 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 IGHV3-7P01780 117 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF883P0CG24 379 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 FABP4P15090 132 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 ERVS71-1P61550 626 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 TMPRSS7Q7RTY8 843 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 ZNF808Q8N4W9 903 aaPredicted RBP11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 PSMF1Q92530 271 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 WFIKKN1Q96NZ8 548 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 LOXL2Q9Y4K0 774 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 CA11O75493 328 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 S100A8P05109 93 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 SOD3P08294 240 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 S100PP25815 95 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 SRD5A2P31213 254 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 RAB2AP61019 212 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 RHEBQ15382 184 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 OR8B8Q15620 311 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 LTC4SQ16873 150 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 TMEM211Q6ICI0 200 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 UNQ6494/PRO21346Q6UXR6 183 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 LRTM2Q8N967 370 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 GATAD1Q8WUU5 269 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 SNX22Q96L94 193 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 NIPSNAP3BQ9BS92 247 aa11.18□□□□□ -0.62
SLC48A1-201ENST00000442218 CEBPZOSA8MTT3 80 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 CYB561P49447 251 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 RNF212Q495C1 297 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 TPRX1Q8N7U7 411 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 WDR54Q9H977 334 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 SEBOXQ9HB31 216 aaPredicted RBP11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 IL17BQ9UHF5 180 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 PCNX1Q96RV3 2341 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BKO60814 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 PITX3O75364 302 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 CDS2O95674 445 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BJP06899 126 aa11.17□□□□□ -0.62
SLC48A1-201ENST00000442218 HIST1H2BOP23527 126 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms