RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 ALKAL1Q6UXT8 129 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 RASSF6Q6ZTQ3 369 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 VKORC1L1Q8N0U8 176 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR1L8Q8NGR8 309 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 SPATA3Q8NHX4 192 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 IL22RA2Q969J5 263 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 SORT1Q99523 831 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 LRRC61Q9BV99 259 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CDC42EP4Q9H3Q1 356 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLCO1B3Q9NPD5 702 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 SPANXA1Q9NS26 97 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 RAB22AQ9UL26 194 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CARHSP1Q9Y2V2 147 aaKnown RBP3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 CARMIL3Q8ND23 1372 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 USP32Q8NFA0 1604 aa3.15□□□□□ -1.91
CDC42BPA-207ENST00000441725 MTCL1Q9Y4B5 1905 aaKnown RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV3OR16-10A0A075B7F0 116 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 F5H5K5 113 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 GABRPO00591 440 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF780AO75290 641 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 FGF1P05230 155 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR5H8P0DN80 308 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGLL1P15814 213 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 AZU1P20160 251 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 LOXP28300 417 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 GALR1P47211 349 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 HIST3H3Q16695 136 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 KLF17Q5JT82 389 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ANKRD22Q5VYY1 191 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF343Q6P1L6 599 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 TOMM20LQ6UXN7 152 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 Q6ZVH6 145 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 C17orf82Q86X59 251 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ACBD7Q8N6N7 88 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZFP41Q8N8Y5 198 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF485Q8NCK3 441 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR4E2Q8NGC2 313 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CANT1Q8WVQ1 401 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 PPCDCQ96CD2 204 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 DIRAS2Q96HU8 199 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 LPAR5Q9H1C0 372 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 PRORYQ9H606 182 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 LAMC1P11047 1609 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 KIF26BQ2KJY2 2108 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 TRAPPC13A5PLN9 417 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 NME4O00746 187 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 STK16O75716 305 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 MMP23AO75900 390 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 PIAS1O75925 651 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 SEMG1P04279 462 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CD79AP11912 226 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 FGF7P21781 194 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 GNGT1P63211 74 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 SP4Q02446 784 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 KRTAP1-1Q07627 177 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 SMAGPQ0VAQ4 97 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 RUNX3Q13761 415 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR8B8Q15620 311 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 LDLRAD2Q5SZI1 272 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM27D1Q5T7N8 215 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 FHL5Q5TD97 284 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 HIST2H3PS2Q5TEC6 136 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OTPQ5XKR4 325 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR10K2Q6IF99 312 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 C18orf65Q6ZTR6 163 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 FAM231DQ6ZW35 169 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CALHM3Q86XJ0 350 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 C8orf59Q8N0T1 100 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CA13Q8N1Q1 262 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 Q8N377 158 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CBR4Q8N4T8 237 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CHST4Q8NCG5 386 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF439Q8NDP4 499 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OR8G5Q8NG78 346 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CHCHD10Q8WYQ3 142 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ROPN1LQ96C74 230 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CCDC115Q96NT0 180 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 CDX2Q99626 313 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 OPRPNQ99935 248 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 SLC25A39Q9BZJ4 359 aaPredicted RBP3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 LINC00470Q9BZP3 86 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 GNB4Q9HAV0 340 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 DOK5Q9P104 306 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ERG28Q9UKR5 140 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 PKIGQ9Y2B9 76 aa3.14□□□□□ -1.91
CDC42BPA-207ENST00000441725 ARHGEF28Q8N1W1 1705 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 CCDC18Q5T9S5 1454 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ABCC5O15440 1437 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGSF9BQ9UPX0 1349 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 IGHV1OR21-1A0A087WYE8 117 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 ZNF816-ZNF321PA0A0X1KG74 233 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 DAPL1A0PJW8 107 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 BTNL10A8MVZ5 291 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 KRBOX1C9JBD0 128 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 EEDO75530 441 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 TBX6O95947 436 aaPredicted RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 PFN1P07737 140 aaKnown RBP3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 CAV1Q03135 178 aa3.13□□□□□ -1.91
CDC42BPA-207ENST00000441725 PAX8Q06710 450 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms