RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 ORC5O43913 435 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 HTR3BO95264 441 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 VEGFCP49767 419 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 ZNF137PP52743 207 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 Q3ZCU0 254 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 ACSM6Q6P461 480 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 SATL1Q86VE3 508 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 ZDHHC13Q8IUH4 622 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 CCDC107Q8WV48 283 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 GPER1Q99527 375 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 GABARAPL1Q9H0R8 117 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 RIBC2Q9H4K1 309 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 IFT22Q9H7X7 185 aa15.92■□□□□ 0.14
TRIM39-210ENST00000440271 LINC01619G3V211 115 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ATP6V0E1O15342 81 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 IGHV4-30-4P0DP06 118 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ZNF134P52741 427 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 MMDQ15546 238 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ATP6AP1Q15904 470 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ASCL4Q6XD76 172 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ZNF439Q8NDP4 499 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 CPNE2Q96FN4 548 aaPredicted RBP15.91■□□□□ 0.14
TRIM39-210ENST00000440271 C4orf36Q96KX1 117 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 FAM192AQ9GZU8 254 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 ST3GAL6Q9Y274 331 aa15.91■□□□□ 0.14
TRIM39-210ENST00000440271 TRAV41A0A0B4J266 112 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 MAGEB3O15480 346 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 OR7C1O76099 320 aaPredicted RBP15.9■□□□□ 0.14
TRIM39-210ENST00000440271 CT45A1Q5HYN5 189 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 Q8N1Y9 231 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 MINDY2Q8NBR6 621 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 CT45A3Q8NHU0 189 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 ARPC1AQ92747 370 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 PARP11Q9NR21 331 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 C19orf73Q9NVV2 129 aa15.9■□□□□ 0.14
TRIM39-210ENST00000440271 MT-ND4P03905 459 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 OR8U9P0C7N5 309 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 RAB3AP20336 220 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 LSAMPQ13449 338 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 OR51A2Q8NGJ7 313 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 RITA1Q96K30 269 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 GABARAPL3Q9BY60 117 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 TOLLIPQ9H0E2 274 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 TPSG1Q9NRR2 321 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 DHDHQ9UQ10 334 aa15.89■□□□□ 0.13
TRIM39-210ENST00000440271 IGHV7-81A0A0B4J1V7 117 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 A8MZ25 164 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 GYG2O15488 501 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 CDRT1O95170 752 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 HLA-DRB1P01911 266 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 RPSAP08865 295 aaKnown RBP15.88■□□□□ 0.13
TRIM39-210ENST00000440271 RBM11P57052 281 aaKnown RBP15.88■□□□□ 0.13
TRIM39-210ENST00000440271 NHLRC3Q5JS37 347 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 ZNF529Q6P280 563 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 ACBD7Q8N6N7 88 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 OR52N1Q8NH53 320 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 OR4C12Q96R67 309 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 GNG12Q9UBI6 72 aa15.88■□□□□ 0.13
TRIM39-210ENST00000440271 IGHV4OR15-8A0A075B7B6 117 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 A0A087WW49 117 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 GEMIN2O14893 280 aaKnown RBP15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ATP8B1O43520 1251 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 LANCL1O43813 399 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 CNTFRP26992 372 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 BLVRBP30043 206 aaPredicted RBP15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ACTBP60709 375 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 DNAL1Q4LDG9 190 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ATAD3CQ5T2N8 411 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ZNF497Q6ZNH5 498 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 LYPD6Q86Y78 171 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 CCDC197Q8NCU1 140 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 OR10V1Q8NGI7 309 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 OR5AK2Q8NH90 309 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 TSEN15Q8WW01 171 aaKnown RBP15.87■□□□□ 0.13
TRIM39-210ENST00000440271 TRUB1Q8WWH5 349 aaKnown RBP15.87■□□□□ 0.13
TRIM39-210ENST00000440271 PDCD1LG2Q9BQ51 273 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 KRTAP17-1Q9BYP8 105 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ANKRD60Q9BZ19 345 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 METTL9Q9H1A3 318 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 ING4Q9UNL4 249 aa15.87■□□□□ 0.13
TRIM39-210ENST00000440271 MRPS28Q9Y2Q9 187 aaKnown RBP15.87■□□□□ 0.13
TRIM39-210ENST00000440271 TMEM212A6NML5 194 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 C12orf77C9JDV5 145 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 AIPO00170 330 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 LGALS1P09382 135 aaKnown RBP15.86■□□□□ 0.13
TRIM39-210ENST00000440271 PITPNAQ00169 270 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 LIN54Q6MZP7 749 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 AMIGO2Q86SJ2 522 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 NEK7Q8TDX7 302 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 ZNF251Q9BRH9 671 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 ISG20L2Q9H9L3 353 aaKnown RBP15.86■□□□□ 0.13
TRIM39-210ENST00000440271 IL36GQ9NZH8 169 aa15.86■□□□□ 0.13
TRIM39-210ENST00000440271 SPINT2O43291 252 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 SOX15O60248 233 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 JTBO76095 146 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 CSTBP04080 98 aaKnown RBP15.85■□□□□ 0.13
TRIM39-210ENST00000440271 FASP25445 335 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 STEAP3Q658P3 488 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 LINC00596Q86U02 117 aa15.85■□□□□ 0.13
TRIM39-210ENST00000440271 LHFPL3Q86UP9 236 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms