RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 HBE1P02100 147 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 GLB1P16278 677 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 ZNF92Q03936 586 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 PLCXD3Q63HM9 321 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 FGFBP3Q8TAT2 258 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 GATAD1Q8WUU5 269 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 CISD1Q9NZ45 108 aaKnown RBP11.6□□□□□ -0.55
PCNX3-202ENST00000439247 MYOTQ9UBF9 498 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 DOCK11Q5JSL3 2073 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 A0A1W2PPQ1 181 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 NPIPA2E9PIF3 369 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 NPIPA3F8WFD2 350 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 NR2C1P13056 603 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 B4GALT1P15291 398 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 RBM11P57052 281 aaKnown RBP11.6□□□□□ -0.55
PCNX3-202ENST00000439247 PMS2P11Q13670 270 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 PLK3Q9H4B4 646 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 DKKL1Q9UK85 242 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 NBEAQ8NFP9 2946 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 ASPMQ8IZT6 3477 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 IGKV1-6A0A0C4DH72 117 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 COX5BP10606 129 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 CEACAM1P13688 526 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 H3F3AP84243 136 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 TESK1Q15569 626 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 TEX38Q6PEX7 206 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 ADPRHL1Q8NDY3 354 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 EXTL1Q92935 676 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 SPIN2AQ99865 258 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 SPIN2BQ9BPZ2 258 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 SMIM7Q9BQ49 75 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 UCK1Q9HA47 277 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 CRIM1Q9NZV1 1036 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 FUT9Q9Y231 359 aa11.6□□□□□ -0.55
PCNX3-202ENST00000439247 MPLP40238 635 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 CNN3Q15417 329 aaKnown RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 ABLIM2Q6H8Q1 611 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 GPR137CQ8N3F9 429 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 ZNF611Q8N823 705 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 OR5L2Q8NGL0 311 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 GPR146Q96CH1 333 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 ALKBH3Q96Q83 286 aaPredicted RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 AURKAIP1Q9NWT8 199 aaPredicted RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 EP300Q09472 2414 aaPredicted RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 IFNA5P01569 189 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 OPN1MWP04001 364 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 PFN1P07737 140 aaKnown RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 OPN1MW2P0DN77 364 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 OPN1MW3P0DN78 364 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 DEFA4P12838 97 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 CD33P20138 364 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 VDAC1P21796 283 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 CRYGSP22914 178 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 HIST1H3AP68431 136 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 TNFRSF9Q07011 255 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 FOXO1Q12778 655 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 SLC10A1Q14973 349 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 DNLZQ5SXM8 178 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 SLC23A3Q6PIS1 610 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 H1FOOQ8IZA3 346 aaPredicted RBP11.59□□□□□ -0.55
PCNX3-202ENST00000439247 TMEM54Q969K7 222 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 KMT2EQ8IZD2 1858 aa11.59□□□□□ -0.55
PCNX3-202ENST00000439247 LRRC3CA6NJW4 275 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 EIF3IQ13347 325 aaKnown RBP11.58□□□□□ -0.56
PCNX3-202ENST00000439247 C10orf128Q5T292 105 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 RAET1LQ5VY80 246 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 HAPLN4Q86UW8 402 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 ZIC4Q8N9L1 334 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 RASL10BQ96S79 203 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 SRD5A3Q9H8P0 318 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 TMEM242Q9NWH2 141 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 TNFSF11O14788 317 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 SYNGR3O43761 229 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 PSG2P11465 335 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 ZNF32P17041 273 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 BCL3P20749 454 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 IDH3GP51553 393 aaPredicted RBP11.58□□□□□ -0.56
PCNX3-202ENST00000439247 CD81P60033 236 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 BAXQ07812 192 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 PNRC1Q12796 327 aaPredicted RBP11.58□□□□□ -0.56
PCNX3-202ENST00000439247 IL24Q13007 206 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 NCR3LG1Q68D85 454 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 Q6ZSR3 168 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 LHFPL2Q6ZUX7 228 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 OR2V1Q8NHB1 315 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 UBALD1Q8TB05 177 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 NEK7Q8TDX7 302 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 ACTR3CQ9C0K3 210 aaPredicted RBP11.58□□□□□ -0.56
PCNX3-202ENST00000439247 TRAV39A0A0B4J263 110 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 IGKV1D-33P01593 117 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 IGKV1-33P01594 117 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 TK1P04183 234 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 BMP5P22003 454 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 C21orf62-AS1Q17RA5 79 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 ASCL4Q6XD76 172 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 RAB24Q969Q5 203 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 TMEM68Q96MH6 324 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 CHRNA10Q9GZZ6 450 aa11.58□□□□□ -0.56
PCNX3-202ENST00000439247 A0A1W2PQM1 296 aa11.57□□□□□ -0.56
PCNX3-202ENST00000439247 A6NNC1 897 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms