RNA–Protein interactions for RNA: ENST00000439193.5

EFEMP1-207, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 4

Gene EFEMP1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-207ENST00000439193 HDHD3Q9BSH5 251 aaPredicted RBP13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 RIMS4Q9H426 269 aaPredicted RBP13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 TAF9BQ9HBM6 251 aa13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 RAB9BQ9NP90 201 aa13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 C12orf4Q9NQ89 552 aa13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 ABRACLQ9P1F3 81 aa13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 SPATA2Q9UM82 520 aa13.34□□□□□ -0.27
EFEMP1-207ENST00000439193 POM121CA8CG34 1229 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 SPINT2O43291 252 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 HOXA3O43365 443 aaPredicted RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 SCGNO76038 276 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 HBZP02008 142 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 LGALS4P56470 323 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 LOXL3P58215 753 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 UBA52P62987 128 aaKnown RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 DYNC1I2Q13409 638 aaKnown RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 SLC9A3R2Q15599 337 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 HMGN3Q15651 99 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 MINOS1Q5TGZ0 78 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 UBALD1Q8TB05 177 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 NDNFQ8TB73 568 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 ZFAND2BQ8WV99 257 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 KCTD12Q96CX2 325 aaKnown RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 ZMAT3Q9HA38 289 aaKnown RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 MINOS1-NBL1R4GNA1 71 aa13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 FBN1P35555 2871 aaKnown RBP13.33□□□□□ -0.28
EFEMP1-207ENST00000439193 SERPINE3A8MV23 424 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 SDCBPO00560 298 aaPredicted RBP13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 GNB3P16520 340 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 IER3P46695 156 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 LTC4SQ16873 150 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 HLA-DRB5Q30154 266 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 KRTAP24-1Q3LI83 254 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 CLVS1Q8IUQ0 354 aaPredicted RBP13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 TMEM86BQ8N661 226 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 OR9G1Q8NH87 305 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 OR1L1Q8NH94 360 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 ZNF596Q8TC21 504 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 RAB2BQ8WUD1 216 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 SSMEM1Q8WWF3 244 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 CMSS1Q9BQ75 279 aaKnown RBP13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 BCL7BQ9BQE9 202 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 MEGF9Q9H1U4 602 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 DCSTAMPQ9H295 470 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 CHMP1AQ9HD42 196 aaPredicted RBP13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 GFOD1Q9NXC2 390 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 KCNIP1Q9NZI2 227 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 POMT1Q9Y6A1 747 aa13.32□□□□□ -0.28
EFEMP1-207ENST00000439193 IGHV4-59P01825 116 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 RNASE1P07998 156 aaKnown RBP13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 TMBIM6P55061 237 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 ARL6IP1Q15041 203 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 Q3ZCU0 254 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 DYNAPQ8N1N2 210 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 LEAP2Q969E1 77 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 MALSU1Q96EH3 234 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 DUX5Q96PT3 197 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 MMP28Q9H239 520 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 PSG11Q9UQ72 335 aa13.31□□□□□ -0.28
EFEMP1-207ENST00000439193 A0A0A6YYH2 397 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 A6NJ64 397 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 TRIM77I1YAP6 450 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 J3QR06 171 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 CD3GP09693 182 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 PAX6P26367 422 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 HTR1DP28221 377 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 PRRX1P54821 245 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 HTD2P86397 168 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 AANATQ16613 207 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 FAM53AQ6NSI3 398 aaPredicted RBP13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 C5orf24Q7Z6I8 188 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 PRR18Q8N4B5 295 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 C8orf31Q8N9H6 132 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 ZNF439Q8NDP4 499 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 ABCG5Q9H222 651 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 Q9N2K0 584 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 MGAT4AQ9UM21 535 aa13.3□□□□□ -0.28
EFEMP1-207ENST00000439193 A0A075B6Q4 140 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 IGHV3-43A0A0B4J1X8 118 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 LY6LH3BQJ8 138 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 BUB1B-PAK6H3BSN5 160 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 TOR1AO14656 332 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 IGHV3-7P01780 117 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 FCGR3AP08637 254 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 GSTP1P09211 210 aaKnown RBP13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 IGHV3-43DP0DP04 118 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 GNG10P50151 68 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 RORCP51449 518 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 HLA-DRB3P79483 266 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 SPCS2Q15005 226 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 SSX2Q16385 188 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 LRRC75BQ2VPJ9 315 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 CDNFQ49AH0 187 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 UBE2NLQ5JXB2 153 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 SETD6Q8TBK2 473 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 FAM216AQ8WUB2 273 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 CREB3L1Q96BA8 519 aa13.29□□□□□ -0.28
EFEMP1-207ENST00000439193 CHIAQ9BZP6 476 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms