RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 FAM96BQ9Y3D0 163 aa13.13□□□□□ -0.31
SNRPB-202ENST00000438552 IGHV3-43A0A0B4J1X8 118 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 ZNF701M0R085 212 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-202ENST00000438552 SPINT2O43291 252 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 TMEM127O75204 238 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 HBZP02008 142 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 FBP1P09467 338 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 IGHV3-43DP0DP04 118 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 CD34P28906 385 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 GNG10P50151 68 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 TMBIM6P55061 237 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 LGALS4P56470 323 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 LDLRAD2Q5SZI1 272 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 FAM53AQ6NSI3 398 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-202ENST00000438552 TRAT1Q6PIZ9 186 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 ZDHHC16Q969W1 377 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 CMSS1Q9BQ75 279 aaKnown RBP13.12□□□□□ -0.31
SNRPB-202ENST00000438552 TAF9BQ9HBM6 251 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 ELF5Q9UKW6 265 aaPredicted RBP13.12□□□□□ -0.31
SNRPB-202ENST00000438552 CEPT1Q9Y6K0 416 aa13.12□□□□□ -0.31
SNRPB-202ENST00000438552 A0A087X0M5 115 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 A0A1B0GX30 115 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 SDCBPO00560 298 aaPredicted RBP13.11□□□□□ -0.31
SNRPB-202ENST00000438552 HOXA3O43365 443 aaPredicted RBP13.11□□□□□ -0.31
SNRPB-202ENST00000438552 NOL3O60936 208 aaKnown RBP13.11□□□□□ -0.31
SNRPB-202ENST00000438552 MELTFP08582 738 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 BAMBIQ13145 260 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 HMGN3Q15651 99 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 ZNF880Q6PDB4 577 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 MOB1BQ7L9L4 216 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 SAMD12Q8N8I0 201 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 ZDHHC22Q8N966 263 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 OR10A7Q8NGE5 316 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 OR4P4Q8NGL7 312 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 ISOC1Q96CN7 298 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 PRDM13Q9H4Q3 707 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 KCNIP1Q9NZI2 227 aa13.11□□□□□ -0.31
SNRPB-202ENST00000438552 TRBV6-6A0A0A6YYG2 114 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 A0A0A6YYJ9 748 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 H3BMQ9 156 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 F2RL2O00254 374 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 SCGNO76038 276 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 IGLV1-47P01700 117 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 CD3GP09693 182 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 RORCP51449 518 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 HLA-DRB3P79483 266 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 MRPS15P82914 257 aaKnown RBP13.1□□□□□ -0.31
SNRPB-202ENST00000438552 GNMTQ14749 295 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 UBE2NLQ5JXB2 153 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 FOXB2Q5VYV0 432 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 Q6YL49 198 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 LDLRAD3Q86YD5 345 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 OR10V1Q8NGI7 309 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 KCTD12Q96CX2 325 aaKnown RBP13.1□□□□□ -0.31
SNRPB-202ENST00000438552 DGCR14Q96DF8 476 aaKnown RBP13.1□□□□□ -0.31
SNRPB-202ENST00000438552 JMJD8Q96S16 334 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 RIMS4Q9H426 269 aaPredicted RBP13.1□□□□□ -0.31
SNRPB-202ENST00000438552 TNFRSF19Q9NS68 423 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 GFOD1Q9NXC2 390 aa13.1□□□□□ -0.31
SNRPB-202ENST00000438552 TBL2Q9Y4P3 447 aaKnown RBP13.1□□□□□ -0.31
SNRPB-202ENST00000438552 TMEM235A6NFC5 223 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 SERPINE3A8MV23 424 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 TOR1AO14656 332 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 IGHV4-59P01825 116 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 FCGR3AP08637 254 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 LOXL3P58215 753 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 UBA52P62987 128 aaKnown RBP13.09□□□□□ -0.31
SNRPB-202ENST00000438552 ARFRP1Q13795 201 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 HLA-DRB5Q30154 266 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 CDNFQ49AH0 187 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 PLA1AQ53H76 456 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 ZNF554Q86TJ5 538 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 IZUMO1Q8IYV9 350 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 OR9G1Q8NH87 305 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 ZNF596Q8TC21 504 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 MAFIPQ8WZ33 124 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 PHF21AQ96BD5 680 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 Q9N2K0 584 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 RAB9BQ9NP90 201 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 COMMD3Q9UBI1 195 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 GNG12Q9UBI6 72 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 RSL24D1Q9UHA3 163 aaKnown RBP13.09□□□□□ -0.31
SNRPB-202ENST00000438552 PSG11Q9UQ72 335 aa13.09□□□□□ -0.31
SNRPB-202ENST00000438552 FBN1P35555 2871 aaKnown RBP13.08□□□□□ -0.32
SNRPB-202ENST00000438552 A0A1W2PPE3 182 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 EIF4EP06730 217 aaKnown RBP13.08□□□□□ -0.32
SNRPB-202ENST00000438552 SLC9A3R2Q15599 337 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 TMEM30BQ3MIR4 351 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 ZNF260Q3ZCT1 412 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 DTX3Q8N9I9 347 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 BEND2Q8NDZ0 799 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 OR52L2PQ8NGH6 319 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 OR52M1Q8NGK5 317 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 NUDCD2Q8WVJ2 157 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 IL1F10Q8WWZ1 152 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 ABCG5Q9H222 651 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 MMP28Q9H239 520 aa13.08□□□□□ -0.32
SNRPB-202ENST00000438552 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNRPB-202ENST00000438552 HILPDAQ9Y5L2 63 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms