RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 CA5BP1Q8WTZ4 195 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 APOBEC3DQ96AK3 386 aaPredicted RBP8.06□□□□□ -1.12
CUX1-206ENST00000437600 PHYHIPLQ96FC7 376 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 PLPPR2Q96GM1 343 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 C20orf24Q9BUV8 137 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 ZFP57Q9NU63 452 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 LPAR3Q9UBY5 353 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 MIOXQ9UGB7 285 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 TP53TG5Q9Y2B4 290 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 SPTAN1Q13813 2472 aaKnown RBP8.06□□□□□ -1.12
CUX1-206ENST00000437600 FGF16O43320 207 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 HOXC12P31275 282 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 APLNRP35414 380 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 ARL6IP1Q15041 203 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 FBXW9Q5XUX1 488 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 DHRS7BQ6IAN0 325 aaPredicted RBP8.06□□□□□ -1.12
CUX1-206ENST00000437600 Q6ZRG5 221 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 C9orf106Q8NAJ2 232 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 SPSB4Q96A44 273 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 KIRREL1Q96J84 757 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 RGCCQ9H4X1 137 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 RNF122Q9H9V4 155 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 OR14J1Q9UGF5 321 aa8.06□□□□□ -1.12
CUX1-206ENST00000437600 ERRFI1Q9UJM3 462 aaPredicted RBP8.06□□□□□ -1.12
CUX1-206ENST00000437600 A0A1B0GV90 55 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 ZNF724A8MTY0 619 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 ATXN7O15265 892 aaPredicted RBP8.05□□□□□ -1.12
CUX1-206ENST00000437600 RRP8O43159 456 aaKnown RBP8.05□□□□□ -1.12
CUX1-206ENST00000437600 DTYMKP23919 212 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 LINC00205P59089 165 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 SURF2Q15527 256 aaPredicted RBP8.05□□□□□ -1.12
CUX1-206ENST00000437600 LIAT1Q6ZQX7 453 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 TPRX1Q8N7U7 411 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 OR1A1Q9P1Q5 309 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 MEMO1Q9Y316 297 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 ADAM20O43506 726 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 TK1P04183 234 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 DAOP14920 347 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 ZNF695Q8IW36 515 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 STOML3Q8TAV4 291 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 MOB3AQ96BX8 217 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 AKR1E2Q96JD6 320 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 LINC00470Q9BZP3 86 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 NCOR1P1Q9H4R4 102 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 DECR2Q9NUI1 292 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 UFSP2Q9NUQ7 469 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 UQCC1Q9NVA1 299 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 RNF150Q9ULK6 438 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 TRAV24A0A0B4J272 114 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 RPL36A-HNRNPH2H7BZ11 118 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 SSSCA1O60232 199 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 PRH1P02810 166 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 RAB5BP61020 215 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 UQCC3Q6UW78 93 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 RBMXL3Q8N7X1 1067 aaKnown RBP8.05□□□□□ -1.12
CUX1-206ENST00000437600 ARL11Q969Q4 196 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 Q9N2K0 584 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 TMEM100Q9NV29 134 aa8.05□□□□□ -1.12
CUX1-206ENST00000437600 RBM7Q9Y580 266 aaKnown RBP8.05□□□□□ -1.12
CUX1-206ENST00000437600 ANKRD30BLA7E2S9 258 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 K7ENP7 123 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 WRBO00258 174 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 WNT9BO14905 357 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 TXNL1O43396 289 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 PET100P0DJ07 73 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 IGHV1-2P23083 117 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 PPT1P50897 306 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 FABP6P51161 128 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 CEBPGP53567 150 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 SPCS3P61009 180 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 FGF12P61328 243 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 KRBOX4Q5JUW0 171 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 CRYBG3Q68DQ2 2970 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 TMEM211Q6ICI0 200 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 INO80CQ6PI98 192 aaPredicted RBP8.04□□□□□ -1.12
CUX1-206ENST00000437600 WDR86Q86TI4 376 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 OR1K1Q8NGR3 316 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 OR5P3Q8WZ94 311 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 SYT3Q9BQG1 590 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 RIMS4Q9H426 269 aaPredicted RBP8.04□□□□□ -1.12
CUX1-206ENST00000437600 PPP1R3CQ9UQK1 317 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 DCHS2Q6V1P9 2916 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 A0A0G2JRQ6 117 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 GPR37O15354 613 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 CNOT4O95628 575 aaKnown RBP8.04□□□□□ -1.12
CUX1-206ENST00000437600 TMEM50AO95807 157 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 IGHV3-13P01766 116 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 IGHV3-7P01780 117 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 S100A8P05109 93 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 TBR1Q16650 682 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 OR2B11Q5JQS5 317 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 RTL6Q6ICC9 239 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 ZADH2Q8N4Q0 377 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 DMBX1Q8NFW5 382 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 C18orf12Q96KH6 178 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 SH3BGRL2Q9UJC5 107 aa8.04□□□□□ -1.12
CUX1-206ENST00000437600 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
CUX1-206ENST00000437600 ST8SIA3O43173 380 aa8.03□□□□□ -1.12
CUX1-206ENST00000437600 CEACAM4O75871 244 aa8.03□□□□□ -1.12
CUX1-206ENST00000437600 CST4P01036 141 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms