RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 R3HDMLQ9H3Y0 253 aa5.24□□□□□ -1.57
VRK2-206ENST00000435505 SMDT1Q9H4I9 107 aa5.24□□□□□ -1.57
VRK2-206ENST00000435505 ZNF665Q9H7R5 613 aa5.24□□□□□ -1.57
VRK2-206ENST00000435505 ELL3Q9HB65 397 aaPredicted RBP5.24□□□□□ -1.57
VRK2-206ENST00000435505 TMEM74BQ9NUR3 256 aa5.24□□□□□ -1.57
VRK2-206ENST00000435505 ZNF107Q9UII5 783 aaPredicted RBP5.24□□□□□ -1.57
VRK2-206ENST00000435505 ST3GAL6Q9Y274 331 aa5.24□□□□□ -1.57
VRK2-206ENST00000435505 LSM5Q9Y4Y9 91 aaKnown RBP5.24□□□□□ -1.57
VRK2-206ENST00000435505 CENPVL1A0A0U1RR11 272 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 A0A1W2PP11 408 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 B4DEV8 164 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 OVOL3O00110 214 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 MMP23AO75900 390 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 RCBTB2O95199 551 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 BRI3O95415 125 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 HIST1H1CP16403 213 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 CFPP27918 469 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 P2RY1P47900 373 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 TBPL1P62380 186 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 RANP62826 216 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 HIST1H3AP68431 136 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 NHLH1Q02575 133 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 FZD2Q14332 565 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 MPV17LQ2QL34 196 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 TMEM176BQ3YBM2 270 aaPredicted RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 TMEM128Q5BJH2 165 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 ZNF506Q5JVG8 444 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 PAPPA-AS1Q5QFB9 102 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 DPY19L2P2Q6ZN68 376 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 HOGA1Q86XE5 327 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 SAXO1Q8IYX7 474 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 TMEM239Q8WW34 195 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 TMEM234Q8WY98 164 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 PINX1Q96BK5 328 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 BPIFA2Q96DR5 249 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 MS4A8Q9BY19 250 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 GLIPR2Q9H4G4 154 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 YIPF1Q9Y548 306 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 SPTBP11277 2137 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 BORCS7-ASMTA0A0B4J1R7 106 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 IGHV2OR16-5A0A0B4J2B6 119 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 F5H5T6 163 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 NUPR1O60356 82 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 HSPB1P04792 205 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 HMGN2P05204 90 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 OR4Q2P0C623 313 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 ZFP36P26651 326 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 BIDP55957 195 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 RPS24P62847 133 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 ACTL10Q5JWF8 245 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 ZNF684Q5T5D7 378 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 ASPHD1Q5U4P2 390 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 COLCA1Q6ZS62 124 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 COMMD2Q86X83 199 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 C9orf40Q8IXQ3 194 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 TMEM256Q8N2U0 113 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 CSNK1A1LQ8N752 337 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 LRTM2Q8N967 370 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 ZNF738Q8NE65 137 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 OR4D5Q8NGN0 318 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 GPR146Q96CH1 333 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 CKLFQ9UBR5 152 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 MRM2Q9UI43 246 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 ZNF443Q9Y2A4 671 aaPredicted RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 MRPS28Q9Y2Q9 187 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 OR1A2Q9Y585 309 aa5.23□□□□□ -1.57
VRK2-206ENST00000435505 MRPS18BQ9Y676 258 aaKnown RBP5.23□□□□□ -1.57
VRK2-206ENST00000435505 SMIM35A0A1B0GVV1 85 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 PRSS37A4D1T9 235 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 VSTM2BA6NLU5 285 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 C1QTNF3-AMACRE9PGA6 284 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 TMEM178BH3BS89 294 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 RS1O15537 224 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 SPINT2O43291 252 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 NXPH3O95157 252 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 LYPD3O95274 346 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 PSG1P11464 419 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 ZNF136P52737 540 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 ARL6IP1Q15041 203 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 TAF9Q16594 264 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 CDKN3Q16667 212 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 CLEC12BQ2HXU8 276 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 IAH1Q2TAA2 248 aaPredicted RBP5.22□□□□□ -1.57
VRK2-206ENST00000435505 SMIM21Q3B7S5 101 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 C6orf226Q5I0X4 101 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 FBXW12Q6X9E4 464 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 FAM220AQ7Z4H9 259 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 DTX1Q86Y01 620 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 ZNF676Q8N7Q3 588 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 ZFP62Q8NB50 900 aaPredicted RBP5.22□□□□□ -1.57
VRK2-206ENST00000435505 OR2D3Q8NGH3 330 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 OR5L1Q8NGL2 311 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 DYRK2Q92630 601 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 IL17FQ96PD4 163 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 OR7D2Q96RA2 312 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 ADOQ96SZ5 270 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 CXXC4Q9H2H0 198 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 TMEM242Q9NWH2 141 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 IKZF2Q9UKS7 526 aa5.22□□□□□ -1.57
VRK2-206ENST00000435505 IGLV3-16A0A075B6K0 115 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms