RNA–Protein interactions for RNA: ENST00000433419.2

CCDC144CP-202, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

BASIC

Gene CCDC144CP, Length 5,227 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-202ENST00000433419 ROM1Q03395 351 aa9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 NEU4Q8WWR8 484 aaPredicted RBP9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 PGLYRP3Q96LB9 341 aa9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 HILPDAQ9Y5L2 63 aa9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 POMT1Q9Y6A1 747 aa9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 DOPEY2Q9Y3R5 2298 aa9.41□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A10PA6NDY2 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A18PA6NE21 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A16PA6NEW6 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A20PA6NIJ5 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A8PA6NJQ4 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A7PA6NKC0 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 DHRS7CA6NNS2 312 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A22PA8MWA6 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A12PA8MX19 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A5PA8MXJ8 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A23PA8MXZ1 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 F5H697 171 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A15PP0C7V4 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A13PP0C7W8 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A14PP0C7W9 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 FAM90A24PP0C7X0 464 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 DEFA6Q01524 100 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 ZFP36L1Q07352 338 aaKnown RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 MGAT2Q10469 447 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 CLLU1Q5K131 121 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 MIXL1Q9H2W2 232 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RHOFQ9HBH0 211 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 MRPS18AQ9NVS2 196 aaKnown RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RABAC1Q9UI14 185 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 TRPM7Q96QT4 1865 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 MIA3Q5JRA6 1907 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 LOC105371242A0A075B767 164 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 IGKV3D-11A0A0A0MRZ8 115 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 CTDSPLO15194 276 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RPS4Y1P22090 263 aaKnown RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 ID1P41134 155 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RAB32Q13637 225 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 TMEM30BQ3MIR4 351 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 SSX7Q7RTT5 188 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 C1orf162Q8NEQ5 155 aaPredicted RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 CHCHD2Q9Y6H1 151 aaPredicted RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 C9orf172C9J069 976 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 C4orf51C9J302 202 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 CD1AP06126 327 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 LIPFP07098 398 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 PF4V1P10720 104 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 PPP1CCP36873 323 aaKnown RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 CDC34P49427 236 aaPredicted RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RPS4XP62701 263 aaKnown RBP9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 H3F3AP84243 136 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 DCAF12L2Q5VW00 463 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 OR1B1Q8NGR6 318 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 TMEM45BQ96B21 275 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 SRXN1Q9BYN0 137 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 DOK5Q9P104 306 aa9.4□□□□□ -0.9
CCDC144CP-202ENST00000433419 RECKO95980 971 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 RPL27AP46776 148 aaKnown RBP9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 LIMS1P48059 325 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 ERVFC1-1P60608 527 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 CEBPEQ15744 281 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 SPINK9Q5DT21 86 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 CALHM1Q8IU99 346 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 STXBP6Q8NFX7 210 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 ZNF488Q96MN9 340 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 GHITMQ9H3K2 345 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 TMEM167BQ9NRX6 74 aa9.4□□□□□ -0.91
CCDC144CP-202ENST00000433419 TRAV8-7A0A075B6U6 113 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 TRAV39A0A0B4J263 110 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 J3QR06 171 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 SCO1O75880 301 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 REG1BP48304 166 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 LOXL3P58215 753 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 OR5M8Q8NGP6 311 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 CLEC5AQ9NY25 188 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 TECRQ9NZ01 308 aaKnown RBP9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 IGLV3-12A0A075B6K2 115 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 H0Y8G0 127 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 MPC2O95563 127 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 UBE2L3P68036 154 aaKnown RBP9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 TMEM88Q6PEY1 159 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 PDPNQ86YL7 162 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 TCTEX1D1Q8N7M0 179 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 BLNKQ8WV28 456 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 PARP11Q9NR21 331 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 SLC2A9Q9NRM0 540 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 IGLV1-36A0A0B4J1U3 117 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 FAM24AA6NFZ4 105 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 SNCGO76070 127 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 FUT5Q11128 374 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 RNASE6Q93091 150 aaKnown RBP9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 CABLES2Q9BTV7 478 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 AKIRIN1Q9H9L7 192 aaPredicted RBP9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 ASCL3Q9NQ33 180 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 SDK2Q58EX2 2172 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 HPRT1P00492 218 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 NPY1RP25929 384 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 PCSK4Q6UW60 755 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 TMEM91Q6ZNR0 172 aa9.39□□□□□ -0.91
CCDC144CP-202ENST00000433419 MMD2Q8IY49 270 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms