RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 ZNF441Q8N8Z8 693 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 GPR146Q96CH1 333 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 P2RX4Q99571 388 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 TRAV1-1A0A0B4J248 108 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 TRAPPC6AO75865 159 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 OR10J1P30954 320 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PSMB3P49720 205 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 MAML2Q8IZL2 1156 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 PLPPR1Q8TBJ4 325 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 DNASE2BQ8WZ79 361 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 EXTL1Q92935 676 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 MRGPRX4Q96LA9 322 aa9.92□□□□□ -0.82
HMGCS1-202ENST00000433297 NPIPA2E9PIF3 369 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 NPIPA3F8WFD2 350 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 GABRG2P18507 467 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 CYP2G1PQ6ZSU1 146 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 PRR18Q8N4B5 295 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 GBGT1Q8N5D6 347 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 IL1F10Q8WWZ1 152 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 MSL2Q9HCI7 577 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 OR6C3Q9NZP0 311 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 SLC22A20A6NK97 555 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 KBTBD11O94819 623 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 CA3P07451 260 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 GNG10P50151 68 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 OR1D5P58170 312 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 COA6Q5JTJ3 125 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 UCN2Q96RP3 112 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 ULBP2Q9BZM5 246 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 CACNG5Q9UF02 275 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 RNF115Q9Y4L5 304 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 RBM7Q9Y580 266 aaKnown RBP9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 GYPAP02724 150 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 PSG2P11465 335 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 DEFA4P12838 97 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 GCH1P30793 250 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 DOCK11Q5JSL3 2073 aa9.91□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF816-ZNF321PA0A0X1KG74 233 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 DHHO43323 396 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 IGLV3-1P01715 115 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TNFSF10P50591 281 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 EIF3IQ13347 325 aaKnown RBP9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TRA2AQ13595 282 aaKnown RBP eCLIP9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 Q6ZRM9 215 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TCF23Q7RTU1 214 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TGIF2LYQ8IUE0 185 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 OR4C12Q96R67 309 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 PPIAL4AQ9Y536 164 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 SDK2Q58EX2 2172 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 CD300LBA8K4G0 201 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 ETV2O00321 342 aaPredicted RBP9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 HNF1AP20823 631 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 HIST1H3AP68431 136 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM211Q6ICI0 200 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 KCNIP4Q6PIL6 250 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 LHFPL2Q6ZUX7 228 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 ZNF611Q8N823 705 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 MBD3L1Q8WWY6 194 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 PYGO2Q9BRQ0 406 aa9.9□□□□□ -0.82
HMGCS1-202ENST00000433297 TMEM210A6NLX4 147 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 G3V3Y1 287 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 SIAH2O43255 324 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF573Q86YE8 665 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 ZDHHC23Q8IYP9 409 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 RPP25LQ8N5L8 163 aaKnown RBP9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 UBALD1Q8TB05 177 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 VN1R17PQ8TDU5 208 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 SGCZQ96LD1 299 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 LPAR2Q9HBW0 351 aa9.9□□□□□ -0.83
HMGCS1-202ENST00000433297 DIDO1Q9BTC0 2240 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 COL4A2P08572 1712 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 C1QTNF9BB2RNN3 333 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 C3orf80F5H4A9 247 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 SYNGR2O43760 224 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 PAGE4O60829 102 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 PGLYRP1O75594 196 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 CCNOP22674 350 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 CTSSP25774 331 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 UCP1P25874 307 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 RBM11P57052 281 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 KCNMB1Q16558 191 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 OR10V1Q8NGI7 309 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 MANBALQ9NQG1 85 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 THADAQ6YHU6 1953 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 M0QZK8 103 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 LINC01565O15544 149 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 LILRA1O75019 489 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 GGCTO75223 188 aaKnown RBP9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 IGKV1D-33P01593 117 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 IGKV1-33P01594 117 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 CRYAAP02489 173 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 PDLIM4P50479 330 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 ZNF525Q8N782 197 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
HMGCS1-202ENST00000433297 PGPEP1LA6NFU8 196 aa9.88□□□□□ -0.83
HMGCS1-202ENST00000433297 SUMO3P55854 103 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms