RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 HLA-DRB1P01911 266 aa17.03■□□□□ 0.32
PTPRA-207ENST00000431048 SLURP1P55000 103 aa17.03■□□□□ 0.32
PTPRA-207ENST00000431048 SRSF7Q16629 238 aaKnown RBP eCLIP17.03■□□□□ 0.32
PTPRA-207ENST00000431048 ZNF439Q8NDP4 499 aa17.03■□□□□ 0.32
PTPRA-207ENST00000431048 SPATA25Q9BR10 227 aa17.03■□□□□ 0.32
PTPRA-207ENST00000431048 MRPS28Q9Y2Q9 187 aaKnown RBP17.03■□□□□ 0.32
PTPRA-207ENST00000431048 ATP6V0E1O15342 81 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 SLC31A2O15432 143 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 SLC2A2P11168 524 aaPredicted RBP17.02■□□□□ 0.32
PTPRA-207ENST00000431048 RSU1Q15404 277 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 MMDQ15546 238 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 STEAP3Q658P3 488 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 ZNF529Q6P280 563 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 TNFAIP8L1Q8WVP5 186 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 ARPC1AQ92747 370 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 PELI1Q96FA3 418 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 OR4C12Q96R67 309 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 GABARAPL1Q9H0R8 117 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 ALX4Q9H161 411 aaPredicted RBP17.02■□□□□ 0.32
PTPRA-207ENST00000431048 RIBC2Q9H4K1 309 aa17.02■□□□□ 0.32
PTPRA-207ENST00000431048 IGHV7-81A0A0B4J1V7 117 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 IGHV3-43A0A0B4J1X8 118 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 DAPL1A0PJW8 107 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 GABRPO00591 440 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 HSPA12AO43301 675 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 LANCL1O43813 399 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 IGHV3-43DP0DP04 118 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 MYF6P23409 242 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 ZNF134P52741 427 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 GNGT1P63211 74 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 LSAMPQ13449 338 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 TMEM30BQ3MIR4 351 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 CT45A1Q5HYN5 189 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 SGPP2Q8IWX5 399 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 OR10K1Q8NGX5 313 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 CT45A3Q8NHU0 189 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 RBMXL1Q96E39 390 aaKnown RBP17.01■□□□□ 0.31
PTPRA-207ENST00000431048 ZNF581Q9P0T4 197 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 ST3GAL6Q9Y274 331 aa17.01■□□□□ 0.31
PTPRA-207ENST00000431048 ARPC1BO15143 372 aaKnown RBP17■□□□□ 0.31
PTPRA-207ENST00000431048 MT-ND4P03905 459 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 LGALS1P09382 135 aaKnown RBP17■□□□□ 0.31
PTPRA-207ENST00000431048 POLR2IP36954 125 aaKnown RBP17■□□□□ 0.31
PTPRA-207ENST00000431048 C19orf54Q5BKX5 351 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 LINC00596Q86U02 117 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 UBALD1Q8TB05 177 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 GPER1Q99527 375 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 RAB9BQ9NP90 201 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 PARP11Q9NR21 331 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 IL36GQ9NZH8 169 aa17■□□□□ 0.31
PTPRA-207ENST00000431048 J3QLW9 94 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 MAGEB3O15480 346 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 OR7C1O76099 320 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-207ENST00000431048 HTR3BO95264 441 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 ZNF19P17023 458 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 RAB3AP20336 220 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 CRIP2P52943 208 aaPredicted RBP16.99■□□□□ 0.31
PTPRA-207ENST00000431048 PITPNAQ00169 270 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 ATP6AP1Q15904 470 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 ZNF497Q6ZNH5 498 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 ZDHHC13Q8IUH4 622 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 CCDC107Q8WV48 283 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 TRUB1Q8WWH5 349 aaKnown RBP16.99■□□□□ 0.31
PTPRA-207ENST00000431048 POMPQ9Y244 141 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 ERGIC3Q9Y282 383 aa16.99■□□□□ 0.31
PTPRA-207ENST00000431048 IGHV4OR15-8A0A075B7B6 117 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 A0A087WW49 117 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 IGLV1-51P01701 117 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 HSPB1P04792 205 aaKnown RBP16.98■□□□□ 0.31
PTPRA-207ENST00000431048 IFNA6P05013 189 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 BLVRBP30043 206 aaPredicted RBP16.98■□□□□ 0.31
PTPRA-207ENST00000431048 RBM11P57052 281 aaKnown RBP16.98■□□□□ 0.31
PTPRA-207ENST00000431048 ACTBP60709 375 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 C5orf64Q2M2E5 130 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 LIN54Q6MZP7 749 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 SATL1Q86VE3 508 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 OR52N1Q8NH53 320 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 IL17DQ8TAD2 202 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 FLYWCH2Q96CP2 140 aaKnown RBP16.98■□□□□ 0.31
PTPRA-207ENST00000431048 C4orf36Q96KX1 117 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 CIB1Q99828 191 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 GABARAPL3Q9BY60 117 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 ANKRD60Q9BZ19 345 aa16.98■□□□□ 0.31
PTPRA-207ENST00000431048 GYS2P54840 703 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 HAGHQ16775 308 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 MPV17LQ2QL34 196 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 SLC25A30Q5SVS4 291 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 LPCAT4Q643R3 524 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 ACBD7Q8N6N7 88 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 TCTEX1D1Q8N7M0 179 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 NPBQ8NG41 125 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 RITA1Q96K30 269 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 MYCBPQ99417 103 aaPredicted RBP16.97■□□□□ 0.31
PTPRA-207ENST00000431048 ZNF251Q9BRH9 671 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 ELOVL1Q9BW60 279 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 CST11Q9H112 138 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 METTL9Q9H1A3 318 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 GNG12Q9UBI6 72 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 STUB1Q9UNE7 303 aa16.97■□□□□ 0.31
PTPRA-207ENST00000431048 DHDHQ9UQ10 334 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms