RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 HIST1H1DP16402 221 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 NFYBP25208 207 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 TMBIM6P55061 237 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 DYNC1I2Q13409 638 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 CLVS1Q8IUQ0 354 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 TMEM86BQ8N661 226 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 BEND2Q8NDZ0 799 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 RAB2BQ8WUD1 216 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 ZFAND2BQ8WV99 257 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 MEGF9Q9H1U4 602 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 ZMAT3Q9HA38 289 aaKnown RBP16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 TAF9BQ9HBM6 251 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 CHMP1AQ9HD42 196 aaPredicted RBP16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 C12orf4Q9NQ89 552 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 ZNRD1Q9P1U0 126 aa16.3■□□□□ 0.2
CSNK1E-207ENST00000430335 DNAJC9-AS1A6NH13 148 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 SERPINE3A8MV23 424 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 HBZP02008 142 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 LHFPL4Q7Z7J7 247 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 OR4P4Q8NGL7 312 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 OR9G1Q8NH87 305 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 C17orf50Q8WW18 174 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 SSMEM1Q8WWF3 244 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 SLC25A38Q96DW6 304 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 MALSU1Q96EH3 234 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 CMSS1Q9BQ75 279 aaKnown RBP16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 DCSTAMPQ9H295 470 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 GFOD1Q9NXC2 390 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 MGAT4AQ9UM21 535 aa16.29■□□□□ 0.2
CSNK1E-207ENST00000430335 A0A0A6YYH2 397 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 A6NJ64 397 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 TRIM77I1YAP6 450 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 GNB3P16520 340 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 HTR1DP28221 377 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 RORCP51449 518 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 PRRX1P54821 245 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 LOXL3P58215 753 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 UBA52P62987 128 aaKnown RBP16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 SLC9A3R2Q15599 337 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 HMGN3Q15651 99 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 LTC4SQ16873 150 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 HLA-DRB5Q30154 266 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 Q3ZCU0 254 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 UTF1Q5T230 341 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 OLFML2AQ68BL7 652 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 Q6ZPA2 131 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 HDHD3Q9BSH5 251 aaPredicted RBP16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 POMT1Q9Y6A1 747 aa16.28■□□□□ 0.2
CSNK1E-207ENST00000430335 FAM172BPA6NC97 362 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 SDCBPO00560 298 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 TOR1AO14656 332 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 HOXA3O43365 443 aaPredicted RBP16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 CD3GP09693 182 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 IER3P46695 156 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 HTD2P86397 168 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 SRSF2Q01130 221 aaKnown RBP16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 AANATQ16613 207 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 LDLRAD2Q5SZI1 272 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 C8orf31Q8N9H6 132 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 OR1L1Q8NH94 360 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 UBALD1Q8TB05 177 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 NDNFQ8TB73 568 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 CREB3L1Q96BA8 519 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 ABCG5Q9H222 651 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 Q9N2K0 584 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 DPM3Q9P2X0 92 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 PSG11Q9UQ72 335 aa16.27■□□□□ 0.2
CSNK1E-207ENST00000430335 J3QR06 171 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 GSTP1P09211 210 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 MRPS15P82914 257 aaKnown RBP16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 CDNFQ49AH0 187 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 PRR18Q8N4B5 295 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 ACOT12Q8WYK0 555 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 PHF21AQ96BD5 680 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 GALMQ96C23 342 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 MMP28Q9H239 520 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 DPAGT1Q9H3H5 408 aa16.26■□□□□ 0.19
CSNK1E-207ENST00000430335 A0A075B6Q4 140 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 BUB1B-PAK6H3BSN5 160 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 RNASE1P07998 156 aaKnown RBP16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 ZNF260Q3ZCT1 412 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 UBE2NLQ5JXB2 153 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 LINC00311Q8N616 119 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 SETD6Q8TBK2 473 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 FAM216AQ8WUB2 273 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 TMEM158Q8WZ71 300 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 LEAP2Q969E1 77 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 CMTM3Q96MX0 182 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 DIABLOQ9NR28 239 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 GNG12Q9UBI6 72 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 JPT1Q9UK76 154 aa16.25■□□□□ 0.19
CSNK1E-207ENST00000430335 IGHV3-43A0A0B4J1X8 118 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 VGLL3A8MV65 326 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 LEUTXA8MZ59 168 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 NOL3O60936 208 aaKnown RBP16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 IGHV4-59P01825 116 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 FCGR3AP08637 254 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 IGHV3-43DP0DP04 118 aa16.24■□□□□ 0.19
CSNK1E-207ENST00000430335 ZNF182P17025 639 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms