RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.53
MSH5-208ENST00000429846 TENM3Q9P273 2699 aa11.71□□□□□ -0.54
MSH5-208ENST00000429846 NBEAL2Q6ZNJ1 2754 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 SPINT2O43291 252 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 RPLP1P05386 114 aaKnown RBP11.7□□□□□ -0.54
MSH5-208ENST00000429846 IGFBP3P17936 291 aaPredicted RBP11.7□□□□□ -0.54
MSH5-208ENST00000429846 CDX1P47902 265 aaPredicted RBP11.7□□□□□ -0.54
MSH5-208ENST00000429846 ETV1P50549 477 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 GPR50Q13585 617 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 SLC22A6Q4U2R8 563 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 C6orf183Q5T699 404 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 TRAT1Q6PIZ9 186 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 SLC25A48Q6ZT89 311 aaKnown RBP11.7□□□□□ -0.54
MSH5-208ENST00000429846 ZNF555Q8NEP9 628 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 OR5M8Q8NGP6 311 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 S1PR3Q99500 378 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 RASL11BQ9BPW5 248 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 DCLRE1BQ9H816 532 aa11.7□□□□□ -0.54
MSH5-208ENST00000429846 RCC2Q9P258 522 aaKnown RBP11.7□□□□□ -0.54
MSH5-208ENST00000429846 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 MCRIP1C9JLW8 97 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 OGG1O15527 345 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 WBP4O75554 376 aaKnown RBP11.69□□□□□ -0.54
MSH5-208ENST00000429846 GPX5O75715 221 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 MT-ND4P03905 459 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 MYL12AP19105 171 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 FSTP19883 344 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 MED21Q13503 144 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 KIR2DS1Q14954 304 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 SMN1Q16637 294 aaKnown RBP11.69□□□□□ -0.54
MSH5-208ENST00000429846 Q499Y3 187 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 YIF1BQ5BJH7 314 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 OR2G6Q5TZ20 316 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 STEAP3Q658P3 488 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 PQLC1Q8N2U9 271 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 FAM71E2Q8N5Q1 922 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 CCDC107Q8WV48 283 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 PLSCR3Q9NRY6 295 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 BABAM2Q9NXR7 383 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 GNG12Q9UBI6 72 aa11.69□□□□□ -0.54
MSH5-208ENST00000429846 DIMT1Q9UNQ2 313 aaKnown RBP11.69□□□□□ -0.54
MSH5-208ENST00000429846 EXOSC1Q9Y3B2 195 aaKnown RBP11.69□□□□□ -0.54
MSH5-208ENST00000429846 IGHV3-43A0A0B4J1X8 118 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 A0A1W2PP11 408 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 FAM90A10PA6NDY2 464 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 FAM90A7PA6NKC0 464 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 FAM90A23PA8MXZ1 464 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 C12orf77C9JDV5 145 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 CA11O75493 328 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 IGHG4P01861 327 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 NHLRC4P0CG21 123 aaPredicted RBP11.68□□□□□ -0.54
MSH5-208ENST00000429846 OR5H8P0DN80 308 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 IGHV3-43DP0DP04 118 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 VDAC1P21796 283 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 SOX6P35712 828 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 RAB25P57735 213 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 CFHR3Q02985 330 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 SYT6Q5T7P8 510 aaPredicted RBP11.68□□□□□ -0.54
MSH5-208ENST00000429846 C9orf66Q5T8R8 295 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 GAPTQ8N292 157 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 ZNF439Q8NDP4 499 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 C4orf3Q8WVX3 66 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 DUX3Q96PT4 197 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 CHCHD6Q9BRQ6 235 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 S100A14Q9HCY8 104 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 SMPD3Q9NY59 655 aaPredicted RBP11.68□□□□□ -0.54
MSH5-208ENST00000429846 ETAA1Q9NY74 926 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 TRAPPC2LQ9UL33 140 aa11.68□□□□□ -0.54
MSH5-208ENST00000429846 IGF1P05019 195 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 DMKNQ6E0U4 476 aaPredicted RBP11.67□□□□□ -0.54
MSH5-208ENST00000429846 ZNF554Q86TJ5 538 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 CDH26Q8IXH8 852 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 OR13C5Q8NGS8 318 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 UBALD1Q8TB05 177 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 TFAP2CQ92754 450 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 GHSRQ92847 366 aa11.67□□□□□ -0.54
MSH5-208ENST00000429846 MRPS28Q9Y2Q9 187 aaKnown RBP11.67□□□□□ -0.54
MSH5-208ENST00000429846 KMT2CQ8NEZ4 4911 aaKnown RBP11.67□□□□□ -0.54
MSH5-208ENST00000429846 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 SLC31A2O15432 143 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 LANCL1O43813 399 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 SC5DO75845 299 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 HBZP02008 142 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 GLAP06280 429 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 PSMB8P28062 276 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 TAS2R43P59537 309 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 FHL3Q13643 280 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 DEFB136Q30KP8 78 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 RAB12Q6IQ22 244 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 GLIPR1L1Q6UWM5 242 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 LCNL1Q6ZST4 164 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 JAGN1Q8N5M9 183 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 THRSPQ92748 146 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 ORAI1Q96D31 301 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 HSPB9Q9BQS6 159 aa11.66□□□□□ -0.54
MSH5-208ENST00000429846 CHCHD3Q9NX63 227 aaKnown RBP11.66□□□□□ -0.54
MSH5-208ENST00000429846 TRAV8-7A0A075B6U6 113 aa11.65□□□□□ -0.54
MSH5-208ENST00000429846 ZNF736B4DX44 427 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms