RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 KMT5CQ86Y97 462 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 TPRX1Q8N7U7 411 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 GATAD1Q8WUU5 269 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 SPIN2AQ99865 258 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 SPIN2BQ9BPZ2 258 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 ATG101Q9BSB4 218 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 TUBA4BQ9H853 241 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 GPR35Q9HC97 309 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 A0A087X0M5 115 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 IGHV1-45A0A0A0MS14 117 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 A0A1B0GX30 115 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 RRP8O43159 456 aaKnown RBP10.69□□□□□ -0.7
CDH3-202ENST00000429102 GRPP07492 148 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 CRYGSP22914 178 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 C10orf128Q5T292 105 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 OR10J5Q8NHC4 309 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 CHRNA10Q9GZZ6 450 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 TRAPPC2LQ9UL33 140 aa10.69□□□□□ -0.7
CDH3-202ENST00000429102 IGKV1-6A0A0C4DH72 117 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 COX6A1P12074 109 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 RAC3P60763 192 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 TLE4Q04727 773 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 CLN3Q13286 438 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 SSX2Q16385 188 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 MAFAQ8NHW3 353 aaPredicted RBP10.68□□□□□ -0.7
CDH3-202ENST00000429102 DEPPQ9NTK1 212 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 PSENENQ9NZ42 101 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 FOXD3Q9UJU5 478 aaPredicted RBP10.68□□□□□ -0.7
CDH3-202ENST00000429102 LAMP3Q9UQV4 416 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 MED13Q9UHV7 2174 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 ATMQ13315 3056 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 hCG_38984A0A1B0GV85 526 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 TSTD3H0UI37 97 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 FOLR2P14207 255 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 EPHA8P29322 1005 aaPredicted RBP10.68□□□□□ -0.7
CDH3-202ENST00000429102 FOLR3P41439 243 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 UBE2G2P60604 165 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 HLA-DRB3P79483 266 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 ARL16Q0P5N6 197 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 C21orf62-AS1Q17RA5 79 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 TCEAL6Q6IPX3 200 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 SSX7Q7RTT5 188 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 RFESDQ8TAC1 157 aa10.68□□□□□ -0.7
CDH3-202ENST00000429102 DEFB108AA8MXU0 73 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 PGLYRP1O75594 196 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 RAB1AP62820 205 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 HIKESHIQ53FT3 197 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 LYRM2Q9NU23 88 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 LOC102725191A0A1B0GVB3 256 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 ZNF503-AS2A6NEH8 195 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 PDGFBP01127 241 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 IGHV2-70P01814 119 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 COL8A2P25067 703 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 OTX1P32242 354 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 TGFBR3Q03167 851 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 MRPL41Q8IXM3 137 aaKnown RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 LFNGQ8NES3 379 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 LHX4Q969G2 390 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 ANGPTL4Q9BY76 406 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 EGLN1Q9GZT9 426 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 SEBOXQ9HB31 216 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 PISDQ9UG56 409 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 BTBD17A6NE02 478 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 VDAC1P21796 283 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 CTSSP25774 331 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 BTNL3Q6UXE8 466 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 FGF23Q9GZV9 251 aaPredicted RBP10.67□□□□□ -0.7
CDH3-202ENST00000429102 FZR1Q9UM11 496 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 TTC28Q96AY4 2481 aa10.67□□□□□ -0.7
CDH3-202ENST00000429102 DMXL2Q8TDJ6 3036 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 IGHV3-43A0A0B4J1X8 118 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 OR6C6A6NF89 314 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 PPIHO43447 177 aaKnown RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 KLF7O75840 302 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 IGHV3-43DP0DP04 118 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 HOXA5P20719 270 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 CDX1P47902 265 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 CST9LP1Q5W188 147 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 SMIM7Q9BQ49 75 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 RBKSQ9H477 322 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 SLC39A9Q9NUM3 307 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 ZNF705FA8MVS1 300 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 RPL36A-HNRNPH2H7BZ11 118 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 IGLV3-1P01715 115 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 CRYAAP02489 173 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 ZNF705DP0CH99 300 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 ZNF705BP0CI00 300 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 MRPL14Q6P1L8 145 aaKnown RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 MCEMP1Q8IX19 187 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 COMMD1Q8N668 190 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 AGBL5Q8NDL9 886 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 OR2V1Q8NHB1 315 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 LYPD6BQ8NI32 183 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 CPT1CQ8TCG5 803 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 ABHD5Q8WTS1 349 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 TAAR9Q96RI9 348 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 UBE2ZQ9H832 354 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 PTPRZ1P23471 2315 aaPredicted RBP10.66□□□□□ -0.7
CDH3-202ENST00000429102 SCGB1D1O95968 90 aa10.66□□□□□ -0.7
CDH3-202ENST00000429102 PRSS8Q16651 343 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms