RNA–Protein interactions for RNA: ENST00000428982.4

SYNGAP1-203, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-203ENST00000428982 C5orf66Q9H5L9 145 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 G6PC2Q9NQR9 355 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 HEATR5AQ86XA9 2040 aa12.57□□□□□ -0.4
SYNGAP1-203ENST00000428982 AHRRA9YTQ3 701 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 KITLGP21583 273 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF695Q8IW36 515 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR51T1Q8NGJ9 327 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 COA3Q9Y2R0 106 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ARL2-SNX15V9GYD0 113 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 SEC16AO15027 2179 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 VSTM5A8MXK1 200 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 OTX2P32243 289 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ARL3P36405 182 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 COA6Q5JTJ3 125 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 PATE3B3GLJ2 98 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 P2RY10O00398 339 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 IGKV1D-16P01601 117 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ASAH2BP0C7U1 165 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 SRP14P37108 136 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 APOBEC1P41238 236 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 CKS1BP61024 79 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 PAX2Q02962 417 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 BAXQ07812 192 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 H1FNTQ75WM6 255 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 MTURNQ8N3F0 131 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 PLEKHF2Q9H8W4 249 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 CTSDP07339 412 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF43P17038 809 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 USF1P22415 310 aaPredicted RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 CLDN18P56856 261 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 SP6Q3SY56 376 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 ARHGEF39Q8N4T4 335 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 SIGMAR1Q99720 223 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 TMEM59Q9BXS4 323 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 NXF5Q9H1B4 397 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 PILRBQ9UKJ0 227 aa12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 MRPS28Q9Y2Q9 187 aaKnown RBP12.56□□□□□ -0.4
SYNGAP1-203ENST00000428982 K7ESF4 209 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 K7N7A8 449 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF93P35789 620 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 GNB2P62879 340 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 EWSR1Q01844 656 aaKnown RBP eCLIP12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 PRTGQ2VWP7 1150 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 CCDC71LQ8N9Z2 235 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 ST8SIA1Q92185 356 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 IMMP2LQ96T52 175 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 KLHDC3Q9BQ90 382 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 CHODLQ9H9P2 273 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 FOXK1P85037 733 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 TLE1Q04724 770 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 SHBQ15464 509 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 YPEL4Q96NS1 127 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 LRP12Q9Y561 859 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 A0A1W2PQD3 144 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 NPIPB7O75200 414 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR8I2Q8N0Y5 310 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 FOXN4Q96NZ1 517 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 CHRDL1Q9BU40 450 aa12.55□□□□□ -0.4
SYNGAP1-203ENST00000428982 LOC102723971A0A1B0GUV8 181 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 KIAA1324LA8MWY0 1029 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 SSSCA1O60232 199 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 CTXN2P0C2S0 81 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 LYL1P12980 280 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 C17orf67Q0P5P2 114 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 CNN3Q15417 329 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 PLPPR5Q32ZL2 321 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 WDR74Q6RFH5 385 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 MARCH3Q86UD3 253 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZPLD1Q8TCW7 415 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 PHF1O43189 567 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 UBE2NP61088 152 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 IGLV3-21P80748 117 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 ROM1Q03395 351 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR10P1Q8NGE3 313 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF665Q9H7R5 613 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 ANKRD10Q9NXR5 420 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 KLHDC2Q9Y2U9 406 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 RBFOX2O43251 390 aaKnown RBP eCLIP12.54□□□□□ -0.48e-7■■■■□ 24.2
SYNGAP1-203ENST00000428982 ZNF737O75373 536 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 CDS2O95674 445 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 IGHG1P01857 330 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 PHLDA2Q53GA4 152 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 FAM69BQ5VUD6 431 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 ATOH7Q8N100 152 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 CLDND2Q8NHS1 167 aa12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 PEF1Q9UBV8 284 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-203ENST00000428982 NRASP01111 189 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 KRASP01116 189 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 ZNF728P0DKX0 622 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 SUMO3P55854 103 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 POU3F1Q03052 451 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 FFAR4Q5NUL3 377 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 OR1N2Q8NGR9 330 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 RTN4IP1Q8WWV3 396 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 ABHD14AQ9BUJ0 271 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 DERL1Q9BUN8 251 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 PIGBOS1A0A0B4J2F0 54 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 FCN1O00602 326 aa12.53□□□□□ -0.4
SYNGAP1-203ENST00000428982 PIGPP57054 158 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms