RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 LINC01356Q8N9X3 169 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 TMEM229BQ8NBD8 167 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR5AP2Q8NGF4 316 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 C8orf46Q8TAG6 207 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 GALMQ96C23 342 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 COX4I2Q96KJ9 171 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 GINS4Q9BRT9 223 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 NECAP2Q9NVZ3 263 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 MCUBQ9NWR8 336 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 TAS2R3Q9NYW6 316 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 GNG12Q9UBI6 72 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 OPN4Q9UHM6 478 aa6.52□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGHV3-43A0A0B4J1X8 118 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 TRAV20A0A0B4J274 112 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ANKRD20A5PA0PJZ0 165 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 FAM172BPA6NC97 362 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 C15orf65H3BRN8 121 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 AMY2AP04746 511 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 IFNA6P05013 189 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 AKAIN1P0CW23 69 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR5H8P0DN80 308 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGHV3-43DP0DP04 118 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 NAT1P18440 290 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 GZMHP20718 246 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 COX7A1P24310 79 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 FPR2P25090 351 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 GZMKP49863 264 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ARF6P62330 175 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 DCTN2Q13561 401 aaKnown RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 KLF9Q13886 244 aaPredicted RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 GNMTQ14749 295 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 MEF2DQ14814 521 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 HERPUD1Q15011 391 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 SRSF7Q16629 238 aaKnown RBP eCLIP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 C17orf58Q2M2W7 97 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 TMEM30BQ3MIR4 351 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGSF11Q5DX21 431 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 METTL11BQ5VVY1 283 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 DCAF12L2Q5VW00 463 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 STEAP3Q658P3 488 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 FAAP20Q6NZ36 180 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF782Q6ZMW2 699 aaPredicted RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 GLCCI1Q86VQ1 547 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 KIR3DL3Q8N743 410 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 LY6G5BQ8NDX9 201 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR52L2PQ8NGH6 319 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR4D10Q8NGI6 311 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR10V1Q8NGI7 309 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR10J5Q8NHC4 309 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 CORO2AQ92828 525 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 CABLES2Q9BTV7 478 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 SUCNR1Q9BXA5 334 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 TINAGL1Q9GZM7 467 aaPredicted RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR2S2Q9NQN1 319 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 MMP26Q9NRE1 261 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 IDI2-AS1Q9NZ38 188 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR1A1Q9P1Q5 309 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF69Q9UC07 566 aa6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZNF107Q9UII5 783 aaPredicted RBP6.51□□□□□ -1.37
HMGA1P4-201ENST00000428643 ARID1AO14497 2285 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 CENPXA8MT69 81 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 DISC1C4P0D8 188 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 M0R1W7 72 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 F2RL2O00254 374 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 MMP23AO75900 390 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 TGFAP01135 160 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGHV3-7P01780 117 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 RBP4P02753 201 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 CD74P04233 296 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 CTXN2P0C2S0 81 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 IGHV4-31P0DP07 118 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 ZBTB25P24278 435 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 PPP1CCP36873 323 aaKnown RBP6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 RFX2P48378 723 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 GNG10P50151 68 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 DVL1P1P54792 670 aaPredicted RBP6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 DLX6P56179 175 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 DEFA1P59665 94 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 DEFA3P59666 94 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 HERV-K104P61576 105 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 TSPAN5P62079 268 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 PAX2Q02962 417 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 CR1LQ2VPA4 569 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 SCGB2B2Q4G0G5 96 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 VAX1Q5SQQ9 334 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 HEPN1Q6WQI6 88 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 TMEM17Q86X19 198 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 LYSMD2Q8IV50 215 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 CIARTQ8N365 385 aaPredicted RBP6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR4C16Q8NGL9 310 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 OR56B4Q8NH76 319 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 LEAP2Q969E1 77 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 TMEM186Q96B77 213 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 MSI2Q96DH6 328 aaKnown RBP6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 PCGF1Q9BSM1 259 aa6.5□□□□□ -1.37
HMGA1P4-201ENST00000428643 METTL8Q9H825 291 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms