RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 MRGPRX1Q96LB2 322 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MS4A10Q96PG2 267 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 ALKBH3Q96Q83 286 aaPredicted RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 SMIM7Q9BQ49 75 aa4.42□□□□□ -1.7
RIF1-203ENST00000428287 MRPL27Q9P0M9 148 aaKnown RBP4.42□□□□□ -1.7
RIF1-203ENST00000428287 CST7O76096 145 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 UTS2O95399 124 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 IGLC2P0DOY2 106 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 IGLC3P0DOY3 106 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 PCSK4Q6UW60 755 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 FOXL2NBQ6ZUU3 175 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 RABEPKQ7Z6M1 372 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 DEFB132Q7Z7B7 95 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZCCHC10Q8TBK6 192 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 FRG2CA6NGY1 282 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 DRD1P21728 446 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 GNALP38405 381 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 DAP3P51398 398 aaKnown RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 CST6Q15828 149 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TMEM182Q6ZP80 229 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 Q6ZWC4 215 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF761Q86XN6 746 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF441Q8N8Z8 693 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 SLC24A4Q8NFF2 622 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF700Q9H0M5 742 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF391Q9UJN7 358 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 FUT9Q9Y231 359 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 LOC101059948A0A1B0GTJ6 334 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF705GA8MUZ8 300 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 OR6A2O95222 327 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 LCATP04180 440 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 HOXB2P14652 356 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 NPPCP23582 126 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 OR1D4P47884 311 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TMEFF1Q8IYR6 380 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 RAC2P15153 192 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 FBXW4P57775 412 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ARF6P62330 175 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 SQSTM1Q13501 440 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ST6GALNAC5Q9BVH7 336 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 COX11Q9Y6N1 276 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 A0A1W2PQ45 241 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 A0A1W2PQY0 241 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 CIDEAO60543 219 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF41P51814 821 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 RUNX1Q01196 453 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 ZNF726P1Q15940 193 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 SLC25A53Q5H9E4 307 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TSPO2Q5TGU0 170 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 CIB3Q96Q77 187 aaPredicted RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 HIDE1A8MVS5 230 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 HLA-DQA2P01906 255 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 RPP30P78346 268 aaKnown RBP4.41□□□□□ -1.7
RIF1-203ENST00000428287 LEMD1Q68G75 181 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TMEM14EPQ6UXP3 125 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 DTX1Q86Y01 620 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 NPRL2Q8WTW4 380 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TMEM234Q8WY98 164 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 EXTL1Q92935 676 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 TBX15Q96SF7 602 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 SPOCK3Q9BQ16 436 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 UQCR10Q9UDW1 63 aa4.41□□□□□ -1.7
RIF1-203ENST00000428287 IGLV3-32A0A0A0MS00 114 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 NKX2-6A6NCS4 301 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 C11orf98E9PRG8 122 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 STMND1H3BQB6 276 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 CRXO43186 299 aaPredicted RBP4.4□□□□□ -1.7
RIF1-203ENST00000428287 GPX1P07203 203 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 CTHP32929 405 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 FASLGP48023 281 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 LHX2P50458 406 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 DYNLT3P51808 116 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 POU3F1Q03052 451 aaPredicted RBP4.4□□□□□ -1.7
RIF1-203ENST00000428287 C6orf201Q7Z4U5 140 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 KMT5CQ86Y97 462 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.4□□□□□ -1.7
RIF1-203ENST00000428287 Q8N7P7 452 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 OR4B1Q8NGF8 309 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 SLC37A2Q8TED4 501 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 SDSLQ96GA7 329 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 BMFQ96LC9 184 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 FAM90A26D6RGX4 464 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 SOX1O00570 391 aaPredicted RBP4.4□□□□□ -1.7
RIF1-203ENST00000428287 CGAP01215 116 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 SLC25A47Q6Q0C1 308 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 OR5B3Q8NH48 314 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 RSG1Q9BU20 258 aa4.4□□□□□ -1.7
RIF1-203ENST00000428287 CHST1O43916 411 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 SOX15O60248 233 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 NUPR1O60356 82 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 PDCD6O75340 191 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 ZNF728P0DKX0 622 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 FKBP2P26885 142 aaKnown RBP4.4□□□□□ -1.71
RIF1-203ENST00000428287 OPRM1P35372 400 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 TM4SF4P48230 202 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 SUMO3P55854 103 aaPredicted RBP4.4□□□□□ -1.71
RIF1-203ENST00000428287 OTPQ5XKR4 325 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 WDR5BQ86VZ2 330 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 OR5P3Q8WZ94 311 aa4.4□□□□□ -1.71
RIF1-203ENST00000428287 FOXQ1Q9C009 403 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms