RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SNRNP40Q96DI7 357 aaKnown RBP8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 MS4A10Q96PG2 267 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 MIEN1Q9BRT3 115 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 SRRQ9GZT4 340 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 AP5S1Q9NUS5 200 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 IL19Q9UHD0 177 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 SHANK3Q9BYB0 1731 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 OR5AL1P0C617 328 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 VSIG10L2P0DP72 767 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 HERVK_113P61574 105 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 NHLH1Q02575 133 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 NHLH2Q02577 135 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 LRRC75BQ2VPJ9 315 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 FAM219BQ5XKK7 198 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 RNASEKQ6P5S7 137 aaKnown RBP8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 GCSAMQ8N6F7 178 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 DTD1Q8TEA8 209 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 PPP1R1CQ8WVI7 109 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 HIGD1AQ9Y241 93 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 OR51B2Q9Y5P1 312 aa8.67□□□□□ -1.02
CLTCL1-202ENST00000427926 A0A1W2PQM1 296 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 J3QR06 171 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 CYB5R3P00387 301 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 UQCRFS1P47985 274 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 CTF1Q16619 201 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 SPANXN1Q5VSR9 72 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 OR10G4Q8NGN3 311 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 OR10G9Q8NGN4 311 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 OR10G7Q8NGN6 311 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 TEX50A0A1B0GTY4 177 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 NUTF2P61970 127 aaKnown RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 TBC1D26Q86UD7 250 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 BAP18Q8IXM2 172 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 C1orf162Q8NEQ5 155 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 FOCADQ5VW36 1801 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 A0A1B0GU03 582 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 ZNF98A6NK75 572 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 OR5AC1P0C628 307 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 ZXDCQ2QGD7 858 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 ZDHHC22Q8N966 263 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 C7orf69Q9H7B7 122 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 TRAV39A0A0B4J263 110 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 COX6A1P12074 109 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 CPN1P15169 458 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 C12orf73Q69YU5 71 aa8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 NEU4Q8WWR8 484 aaPredicted RBP8.66□□□□□ -1.02
CLTCL1-202ENST00000427926 MAP1LC3B2A6NCE7 125 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 SPINK4O60575 86 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 RHBDL1O75783 438 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 SLC25A53Q5H9E4 307 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 XAF1Q6GPH4 301 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 ZBTB34Q8NCN2 500 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 OR1K1Q8NGR3 316 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 SMIM4Q8WVI0 70 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 MAP1LC3BQ9GZQ8 125 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 A0A1B0GV72 72 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 NPIPB6E9PJ23 425 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 BMPR1BO00238 502 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 THY1P04216 161 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 CSF2RBP32927 897 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 LCN2P80188 198 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 MRPL37Q9BZE1 423 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 TOLLIPQ9H0E2 274 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 ASCC3Q8N3C0 2202 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 ANKRD31Q8N7Z5 1873 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 IGSF23A1L1A6 192 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 C1QBP02746 253 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 EVX1P49640 407 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 CFHR1Q03591 330 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 MRM1Q6IN84 353 aaKnown RBP8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 UNQ6494/PRO21346Q6UXR6 183 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 TPRX1Q8N7U7 411 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 SPTA1P02549 2419 aa8.65□□□□□ -1.02
CLTCL1-202ENST00000427926 CD160O95971 181 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 COL8A1P27658 744 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 PSG5Q15238 335 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 FAM78BQ5VT40 261 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 CCL27Q9Y4X3 112 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 TMEM56-RWDD3S4R434 201 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 ARFGEF1Q9Y6D6 1849 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 QSER1Q2KHR3 1735 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 WDR90Q96KV7 1748 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 POLR2AP24928 1970 aaKnown RBP8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 KIAA1217Q5T5P2 1943 aa8.65□□□□□ -1.03
CLTCL1-202ENST00000427926 MFSD2BA6NFX1 497 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 KCNAB3O43448 404 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 SFT2D2O95562 160 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 BGLAPP02818 100 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 PDZK1IP1Q13113 114 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 LYRM2Q9NU23 88 aaPredicted RBP8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 FLRT3Q9NZU0 649 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 NAT8BQ9UHF3 227 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 P01737 135 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 PRSS1P07477 247 aa8.64□□□□□ -1.03
CLTCL1-202ENST00000427926 GABRB1P18505 474 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms