RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 CEACAM3P40198 252 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 Q6ZTK2 550 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 OR4K15Q8NH41 348 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 NEK7Q8TDX7 302 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 PHYHIPQ92561 330 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 CREB3L1Q96BA8 519 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 RBM14Q96PK6 669 aaKnown RBP15.29■□□□□ 0.04
COL9A2-204ENST00000427563 SLC25A33Q9BSK2 321 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 LIN7BQ9HAP6 207 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 VCX3AQ9NNX9 186 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 PEX16Q9Y5Y5 336 aa15.29■□□□□ 0.04
COL9A2-204ENST00000427563 NOTCH1P46531 2555 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 ADARB2-AS1A8MUL3 147 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 OOSP1A8MZH6 123 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 C12orf77C9JDV5 145 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 ORC5O43913 435 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 VSIG8P0DPA2 414 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 BRS3P32247 399 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 QRFPP83859 136 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 UNC119Q13432 240 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 SLC16A12Q6ZSM3 486 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 C16orf82Q7Z2V1 217 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 LYG1Q8N1E2 194 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 FAM110DQ8TAY7 271 aaPredicted RBP15.28■□□□□ 0.04
COL9A2-204ENST00000427563 TOMM40LQ969M1 308 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 MRPS26Q9BYN8 205 aaKnown RBP15.28■□□□□ 0.04
COL9A2-204ENST00000427563 SPACA1Q9HBV2 294 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 NDUFB11Q9NX14 153 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 GFOD1Q9NXC2 390 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 ETAA1Q9NY74 926 aa15.28■□□□□ 0.04
COL9A2-204ENST00000427563 PRKDCP78527 4128 aaKnown RBP15.27■□□□□ 0.04
COL9A2-204ENST00000427563 UBE2QL1A1L167 161 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 MCRIP1C9JLW8 97 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 CCRL2O00421 344 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 SLC31A2O15432 143 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 OR2F2O95006 317 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 RCC1P18754 421 aaPredicted RBP15.27■□□□□ 0.04
COL9A2-204ENST00000427563 SRMP19623 302 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 C2orf68Q2NKX9 166 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 HSD17B12Q53GQ0 312 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 Q6ZPA2 131 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 DRAM1Q8N682 238 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 OR52M1Q8NGK5 317 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 OR56B4Q8NH76 319 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 RPEQ96AT9 228 aa15.27■□□□□ 0.04
COL9A2-204ENST00000427563 AMMECR1Q9Y4X0 333 aaPredicted RBP15.27■□□□□ 0.04
COL9A2-204ENST00000427563 A0A0A6YYD4 124 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 SDCBPO00560 298 aaPredicted RBP15.26■□□□□ 0.03
COL9A2-204ENST00000427563 SLC22A1O15245 554 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 MPIG6BO95866 241 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 SNRNP70P08621 437 aaKnown RBP15.26■□□□□ 0.03
COL9A2-204ENST00000427563 CSF1P09603 554 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 FUT3P21217 361 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 PSMA1P25786 263 aaKnown RBP15.26■□□□□ 0.03
COL9A2-204ENST00000427563 MADCAM1Q13477 382 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 TRAM1Q15629 374 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 CCDC144NLQ6NUI1 221 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 LINC00311Q8N616 119 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 ZNF439Q8NDP4 499 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 OR1L1Q8NH94 360 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 MRPL30Q8TCC3 161 aaKnown RBP15.26■□□□□ 0.03
COL9A2-204ENST00000427563 CAPSLQ8WWF8 208 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 ST6GALNAC6Q969X2 333 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 RBMXL1Q96E39 390 aaKnown RBP15.26■□□□□ 0.03
COL9A2-204ENST00000427563 GHRLQ9UBU3 117 aa15.26■□□□□ 0.03
COL9A2-204ENST00000427563 TMEM14DPA8MWL7 114 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 PDCD6O75340 191 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 CHATP28329 748 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 HTR2CP28335 458 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 VDAC2P45880 294 aaPredicted RBP15.25■□□□□ 0.03
COL9A2-204ENST00000427563 ZNF134P52741 427 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 FABP5Q01469 135 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 ABCA11PQ4W5N1 156 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 GLT8D1Q68CQ7 371 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 THNSL2Q86YJ6 484 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 DTX3Q8N9I9 347 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 SULT4A1Q9BR01 284 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 NICN1Q9BSH3 213 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 MBNL3Q9NUK0 354 aaKnown RBP15.25■□□□□ 0.03
COL9A2-204ENST00000427563 TRAPPC2LQ9UL33 140 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 PLXNB1O43157 2135 aa15.25■□□□□ 0.03
COL9A2-204ENST00000427563 FBXO24O75426 580 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 HBZP02008 142 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 GLAP06280 429 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 UBBP0CG47 229 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 MNDAP41218 407 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 REG1BP48304 166 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 RPS27AP62979 156 aaKnown RBP15.24■□□□□ 0.03
COL9A2-204ENST00000427563 DEFA6Q01524 100 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 ZNF816Q0VGE8 651 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-204ENST00000427563 TCTEX1D4Q5JR98 221 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 C10orf99Q6UWK7 81 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 C8orf31Q8N9H6 132 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 CITED2Q99967 270 aaPredicted RBP15.24■□□□□ 0.03
COL9A2-204ENST00000427563 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 CST11Q9H112 138 aa15.24■□□□□ 0.03
COL9A2-204ENST00000427563 HSD17B6O14756 317 aa15.23■□□□□ 0.03
COL9A2-204ENST00000427563 LPLP06858 475 aa15.23■□□□□ 0.03
COL9A2-204ENST00000427563 RAB7AP51149 207 aa15.23■□□□□ 0.03
COL9A2-204ENST00000427563 ARHGDIBP52566 201 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms