RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 FUT3P21217 361 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 GABPB1Q06547 395 aaPredicted RBP8.1□□□□□ -1.11
COMMD1-202ENST00000427417 SPHARQ15513 63 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 BEAN1Q3B7T3 259 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 ACSM3Q53FZ2 586 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 C6orf141Q5SZD1 244 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 SAMD5Q5TGI4 173 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 GLT8D1Q68CQ7 371 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 MOB3BQ86TA1 216 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 LYPD6Q86Y78 171 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 BANF2Q9H503 90 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 TPRKBQ9Y3C4 175 aa8.1□□□□□ -1.11
COMMD1-202ENST00000427417 IGHV1-3A0A0C4DH29 117 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 A0A1W2PPE3 182 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 A0A1W2PRX2 142 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 PSMB11A5LHX3 300 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 C12orf77C9JDV5 145 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 ANKRD65E5RJM6 399 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 H0YHG0 523 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 SC5DO75845 299 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 IGKV1D-33P01593 117 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 IGKV1-33P01594 117 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 CD33P20138 364 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 LOXL3P58215 753 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 DIAPH2-AS1Q14236 149 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 MED22Q15528 200 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 RBM48Q5RL73 367 aaKnown RBP8.09□□□□□ -1.11
COMMD1-202ENST00000427417 KPRPQ5T749 579 aaPredicted RBP8.09□□□□□ -1.11
COMMD1-202ENST00000427417 UNQ9370/PRO34162Q6UXP9 181 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 REC114Q7Z4M0 266 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 ZNF554Q86TJ5 538 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 IZUMO1Q8IYV9 350 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 GAPTQ8N292 157 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 PRR18Q8N4B5 295 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 C5orf56Q8N8D9 126 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 TMEM104Q8NE00 496 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 OR2T10Q8NGZ9 312 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 OR4K15Q8NH41 348 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 CHPT1Q8WUD6 406 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 PHYHIPQ92561 330 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 UFD1Q92890 307 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 Q96M66 194 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 TMED9Q9BVK6 235 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 VCX3BQ9H321 246 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 KCNIP1Q9NZI2 227 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 GNG12Q9UBI6 72 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 NOTCH3Q9UM47 2321 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 TGP01266 2768 aa8.09□□□□□ -1.11
COMMD1-202ENST00000427417 IGHV3-43A0A0B4J1X8 118 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 SH2D7A6NKC9 451 aaPredicted RBP8.08□□□□□ -1.12
COMMD1-202ENST00000427417 PDCD6O75340 191 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 MPIG6BO95866 241 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 PF4P02776 101 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 IGHV3-43DP0DP04 118 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 SRMP19623 302 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 REG1BP48304 166 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 SLC35B1P78383 322 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 EBI3Q14213 229 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 HNF4GQ14541 408 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 TRAM1Q15629 374 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 HSD17B12Q53GQ0 312 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 KHDC1LQ5JSQ8 128 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 STEAP3Q658P3 488 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 SLC25A48Q6ZT89 311 aaKnown RBP8.08□□□□□ -1.12
COMMD1-202ENST00000427417 CEACAM19Q7Z692 300 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 TGIF2LXQ8IUE1 241 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 FOXRED2Q8IWF2 684 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 OR8H1Q8NGG4 311 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 UBALD1Q8TB05 177 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 RTN4IP1Q8WWV3 396 aaPredicted RBP8.08□□□□□ -1.12
COMMD1-202ENST00000427417 FAM46BQ96A09 425 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 NEDD4LQ96PU5 975 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 MBNL3Q9NUK0 354 aaKnown RBP8.08□□□□□ -1.12
COMMD1-202ENST00000427417 LRRC42Q9Y546 428 aa8.08□□□□□ -1.12
COMMD1-202ENST00000427417 UBE2QL1A1L167 161 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 NCBP2LA6PVI3 153 aaKnown RBP8.07□□□□□ -1.12
COMMD1-202ENST00000427417 SERPINE3A8MV23 424 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 RGS11O94810 467 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 MOSP00540 346 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 HBZP02008 142 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 PSMA1P25786 263 aaKnown RBP8.07□□□□□ -1.12
COMMD1-202ENST00000427417 CD1BP29016 333 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 RANBP1P43487 201 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 ZNF137PP52743 207 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 AQP4P55087 323 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 SLC35A2P78381 396 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 OXLD1Q5BKU9 147 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 TCTEX1D4Q5JR98 221 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 NKAPLQ5M9Q1 402 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 C1orf100Q5SVJ3 147 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 SLC35E3Q7Z769 313 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 COMMD1Q8N668 190 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 WFDC9Q8NEX5 89 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 OR51D1Q8NGF3 324 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 KCNG3Q8TAE7 436 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 ST6GALNAC6Q969X2 333 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 EAF1Q96JC9 268 aaPredicted RBP8.07□□□□□ -1.12
COMMD1-202ENST00000427417 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 GON7Q9BXV9 100 aa8.07□□□□□ -1.12
COMMD1-202ENST00000427417 TAF9BQ9HBM6 251 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms